Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3596 and GFF3597 are separated by 494 nucleotides GFF3597 and GFF3598 are separated by 53 nucleotides
GFF3596 - hypothetical protein, at 455,991 to 456,635
GFF3596
GFF3597 - hypothetical protein, at 457,130 to 458,368
GFF3597
GFF3598 - Energy-dependent translational throttle protein EttA, at 458,422 to 460,077
GFF3598
Position (kb) 457
458
459 Strain fitness (log2 ratio) -2
-1
0
1
2 at 456.214 kb on + strand, within GFF3596 at 456.214 kb on + strand, within GFF3596 at 456.215 kb on - strand, within GFF3596 at 456.215 kb on - strand, within GFF3596 at 456.223 kb on + strand, within GFF3596 at 456.224 kb on - strand, within GFF3596 at 456.224 kb on - strand, within GFF3596 at 456.224 kb on - strand, within GFF3596 at 456.892 kb on + strand at 456.903 kb on + strand at 456.904 kb on - strand at 456.969 kb on + strand at 456.975 kb on - strand at 456.985 kb on - strand at 456.985 kb on - strand at 457.020 kb on - strand at 457.065 kb on + strand at 457.073 kb on + strand at 457.073 kb on + strand at 457.074 kb on - strand at 457.078 kb on + strand at 457.078 kb on + strand at 457.079 kb on - strand at 457.079 kb on - strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.123 kb on + strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.124 kb on - strand at 457.133 kb on + strand at 457.133 kb on + strand at 457.133 kb on + strand at 457.134 kb on - strand at 457.134 kb on - strand at 457.152 kb on - strand at 457.219 kb on + strand at 457.293 kb on - strand, within GFF3597 at 457.309 kb on - strand, within GFF3597 at 457.313 kb on - strand, within GFF3597 at 457.443 kb on - strand, within GFF3597 at 457.487 kb on + strand, within GFF3597 at 457.488 kb on - strand, within GFF3597 at 457.488 kb on - strand, within GFF3597 at 457.538 kb on - strand, within GFF3597 at 457.681 kb on - strand, within GFF3597 at 457.683 kb on - strand, within GFF3597 at 457.683 kb on - strand, within GFF3597 at 457.691 kb on - strand, within GFF3597 at 457.714 kb on + strand, within GFF3597 at 457.714 kb on + strand, within GFF3597 at 457.715 kb on - strand, within GFF3597 at 457.756 kb on - strand, within GFF3597 at 457.844 kb on + strand, within GFF3597 at 457.847 kb on + strand, within GFF3597 at 458.055 kb on - strand, within GFF3597 at 458.082 kb on - strand, within GFF3597 at 458.089 kb on + strand, within GFF3597 at 458.090 kb on - strand, within GFF3597 at 458.133 kb on + strand, within GFF3597 at 458.133 kb on + strand, within GFF3597 at 458.133 kb on + strand, within GFF3597 at 458.134 kb on - strand, within GFF3597 at 458.152 kb on + strand, within GFF3597 at 458.153 kb on - strand, within GFF3597 at 458.192 kb on - strand, within GFF3597 at 458.306 kb on + strand at 458.306 kb on + strand at 458.306 kb on + strand at 458.307 kb on - strand at 458.307 kb on - strand at 458.307 kb on - strand at 458.344 kb on + strand at 458.345 kb on - strand at 458.345 kb on - strand at 458.345 kb on - strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.346 kb on + strand at 458.347 kb on - strand at 458.347 kb on - strand at 458.347 kb on - strand at 458.347 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 456,214 + GFF3596 0.35 -0.7 456,214 + GFF3596 0.35 -0.0 456,215 - GFF3596 0.35 -0.2 456,215 - GFF3596 0.35 +0.7 456,223 + GFF3596 0.36 -0.5 456,224 - GFF3596 0.36 -0.0 456,224 - GFF3596 0.36 -1.3 456,224 - GFF3596 0.36 -0.3 456,892 + +0.7 456,903 + -0.3 456,904 - -0.1 456,969 + +0.6 456,975 - -0.3 456,985 - -0.9 456,985 - -1.8 457,020 - +0.3 457,065 + -0.4 457,073 + -0.0 457,073 + -0.5 457,074 - -1.2 457,078 + +1.6 457,078 + -0.8 457,079 - +0.1 457,079 - +0.7 457,123 + -0.1 457,123 + +0.3 457,123 + -0.0 457,123 + +0.8 457,123 + +0.5 457,124 - -0.7 457,124 - +0.2 457,124 - +0.3 457,124 - -0.4 457,124 - +0.5 457,124 - -0.5 457,124 - +0.6 457,133 + +0.8 457,133 + +0.4 457,133 + +0.2 457,134 - -0.1 457,134 - -0.3 457,152 - +0.2 457,219 + -0.4 457,293 - GFF3597 0.13 -1.7 457,309 - GFF3597 0.14 -0.6 457,313 - GFF3597 0.15 -0.5 457,443 - GFF3597 0.25 -0.6 457,487 + GFF3597 0.29 +0.1 457,488 - GFF3597 0.29 +0.6 457,488 - GFF3597 0.29 -0.3 457,538 - GFF3597 0.33 +0.8 457,681 - GFF3597 0.44 -1.4 457,683 - GFF3597 0.45 -0.2 457,683 - GFF3597 0.45 +0.9 457,691 - GFF3597 0.45 -0.5 457,714 + GFF3597 0.47 +2.3 457,714 + GFF3597 0.47 -0.5 457,715 - GFF3597 0.47 +0.7 457,756 - GFF3597 0.51 -0.6 457,844 + GFF3597 0.58 +0.2 457,847 + GFF3597 0.58 +1.2 458,055 - GFF3597 0.75 -0.4 458,082 - GFF3597 0.77 +1.3 458,089 + GFF3597 0.77 +0.4 458,090 - GFF3597 0.77 -0.5 458,133 + GFF3597 0.81 +1.2 458,133 + GFF3597 0.81 +0.9 458,133 + GFF3597 0.81 -0.5 458,134 - GFF3597 0.81 +0.2 458,152 + GFF3597 0.82 -0.6 458,153 - GFF3597 0.83 -0.1 458,192 - GFF3597 0.86 -1.0 458,306 + -0.9 458,306 + +1.3 458,306 + +1.0 458,307 - -0.9 458,307 - +0.8 458,307 - -1.1 458,344 + -0.9 458,345 - +0.1 458,345 - -1.1 458,345 - -0.6 458,346 + +0.1 458,346 + +0.5 458,346 + +0.4 458,346 + +1.0 458,346 + -2.4 458,346 + -0.2 458,346 + +1.2 458,346 + +0.6 458,346 + +1.1 458,347 - +0.2 458,347 - +0.4 458,347 - +0.7 458,347 - -1.5
Or see this region's nucleotide sequence