Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3433 and GFF3434 are separated by 86 nucleotides GFF3434 and GFF3435 are separated by 245 nucleotides
GFF3433 - Phosphate-import ATP-binding protein PhnC, at 285,273 to 286,085
GFF3433
GFF3434 - Phosphate-import protein PhnD, at 286,172 to 287,080
GFF3434
GFF3435 - hypothetical protein, at 287,326 to 288,210
GFF3435
Position (kb) 286
287
288 Strain fitness (log2 ratio) -2
-1
0
1 at 285.322 kb on + strand at 285.557 kb on - strand, within GFF3433 at 285.903 kb on + strand, within GFF3433 at 285.904 kb on - strand, within GFF3433 at 286.186 kb on + strand at 286.259 kb on + strand at 286.337 kb on + strand, within GFF3434 at 286.338 kb on - strand, within GFF3434 at 286.338 kb on - strand, within GFF3434 at 286.389 kb on - strand, within GFF3434 at 286.439 kb on + strand, within GFF3434 at 286.529 kb on + strand, within GFF3434 at 286.544 kb on + strand, within GFF3434 at 286.544 kb on + strand, within GFF3434 at 286.545 kb on - strand, within GFF3434 at 286.566 kb on - strand, within GFF3434 at 286.566 kb on - strand, within GFF3434 at 286.566 kb on - strand, within GFF3434 at 286.566 kb on - strand, within GFF3434 at 286.566 kb on - strand, within GFF3434 at 286.700 kb on + strand, within GFF3434 at 286.701 kb on - strand, within GFF3434 at 286.701 kb on - strand, within GFF3434 at 286.725 kb on + strand, within GFF3434 at 286.827 kb on - strand, within GFF3434 at 286.827 kb on - strand, within GFF3434 at 286.827 kb on - strand, within GFF3434 at 286.847 kb on + strand, within GFF3434 at 286.848 kb on - strand, within GFF3434 at 286.877 kb on + strand, within GFF3434 at 286.877 kb on + strand, within GFF3434 at 286.884 kb on - strand, within GFF3434 at 286.976 kb on + strand, within GFF3434 at 287.021 kb on + strand at 287.022 kb on - strand at 287.227 kb on + strand at 287.261 kb on + strand at 287.261 kb on + strand at 287.622 kb on + strand, within GFF3435 at 287.622 kb on + strand, within GFF3435 at 287.889 kb on + strand, within GFF3435 at 287.890 kb on - strand, within GFF3435
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 285,322 + +1.0 285,557 - GFF3433 0.35 -0.3 285,903 + GFF3433 0.77 -1.3 285,904 - GFF3433 0.78 -0.4 286,186 + +0.5 286,259 + -0.4 286,337 + GFF3434 0.18 -0.1 286,338 - GFF3434 0.18 +0.2 286,338 - GFF3434 0.18 -0.4 286,389 - GFF3434 0.24 +0.1 286,439 + GFF3434 0.29 -0.5 286,529 + GFF3434 0.39 -1.5 286,544 + GFF3434 0.41 -1.0 286,544 + GFF3434 0.41 -0.4 286,545 - GFF3434 0.41 -0.3 286,566 - GFF3434 0.43 -0.3 286,566 - GFF3434 0.43 -0.5 286,566 - GFF3434 0.43 +0.1 286,566 - GFF3434 0.43 -1.5 286,566 - GFF3434 0.43 +0.0 286,700 + GFF3434 0.58 +0.6 286,701 - GFF3434 0.58 +0.5 286,701 - GFF3434 0.58 +0.1 286,725 + GFF3434 0.61 -0.3 286,827 - GFF3434 0.72 -0.7 286,827 - GFF3434 0.72 +0.7 286,827 - GFF3434 0.72 +0.3 286,847 + GFF3434 0.74 +1.4 286,848 - GFF3434 0.74 -0.6 286,877 + GFF3434 0.78 +0.8 286,877 + GFF3434 0.78 -0.5 286,884 - GFF3434 0.78 -0.8 286,976 + GFF3434 0.88 +0.4 287,021 + -2.4 287,022 - -0.0 287,227 + +0.5 287,261 + +0.4 287,261 + +0.2 287,622 + GFF3435 0.33 +0.7 287,622 + GFF3435 0.33 +0.1 287,889 + GFF3435 0.64 -0.8 287,890 - GFF3435 0.64 +0.6
Or see this region's nucleotide sequence