Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2899 and GFF2900 are separated by 68 nucleotides GFF2900 and GFF2901 are separated by 15 nucleotides
GFF2899 - Cardiolipin synthase A, at 614,423 to 615,868
GFF2899
GFF2900 - 3-keto-5-aminohexanoate cleavage enzyme, at 615,937 to 616,785
GFF2900
GFF2901 - C4-dicarboxylate transport transcriptional regulatory protein DctD, at 616,801 to 618,174
GFF2901
Position (kb) 615
616
617 Strain fitness (log2 ratio) -2
-1
0
1 at 615.165 kb on + strand, within GFF2899 at 615.166 kb on - strand, within GFF2899 at 615.429 kb on + strand, within GFF2899 at 615.429 kb on + strand, within GFF2899 at 615.429 kb on + strand, within GFF2899 at 615.429 kb on + strand, within GFF2899 at 615.429 kb on + strand, within GFF2899 at 615.430 kb on - strand, within GFF2899 at 615.705 kb on + strand, within GFF2899 at 615.706 kb on - strand, within GFF2899 at 615.834 kb on + strand at 615.906 kb on + strand at 615.907 kb on - strand at 615.907 kb on - strand at 615.947 kb on + strand at 615.948 kb on - strand at 616.302 kb on - strand, within GFF2900 at 616.325 kb on + strand, within GFF2900 at 616.326 kb on - strand, within GFF2900 at 616.484 kb on + strand, within GFF2900 at 616.485 kb on - strand, within GFF2900 at 616.485 kb on - strand, within GFF2900 at 616.485 kb on - strand, within GFF2900 at 616.485 kb on - strand, within GFF2900 at 616.566 kb on - strand, within GFF2900 at 616.566 kb on - strand, within GFF2900 at 616.614 kb on + strand, within GFF2900 at 617.114 kb on + strand, within GFF2901 at 617.114 kb on + strand, within GFF2901 at 617.114 kb on + strand, within GFF2901 at 617.114 kb on + strand, within GFF2901 at 617.115 kb on - strand, within GFF2901 at 617.272 kb on - strand, within GFF2901 at 617.310 kb on + strand, within GFF2901 at 617.310 kb on + strand, within GFF2901 at 617.555 kb on - strand, within GFF2901
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 615,165 + GFF2899 0.51 -0.3 615,166 - GFF2899 0.51 +0.1 615,429 + GFF2899 0.70 -1.6 615,429 + GFF2899 0.70 -0.9 615,429 + GFF2899 0.70 +0.1 615,429 + GFF2899 0.70 -1.1 615,429 + GFF2899 0.70 -0.3 615,430 - GFF2899 0.70 -0.0 615,705 + GFF2899 0.89 +0.3 615,706 - GFF2899 0.89 -0.7 615,834 + -0.2 615,906 + -0.1 615,907 - +1.3 615,907 - -0.2 615,947 + -0.4 615,948 - -0.3 616,302 - GFF2900 0.43 -2.3 616,325 + GFF2900 0.46 -0.9 616,326 - GFF2900 0.46 +0.7 616,484 + GFF2900 0.64 +1.6 616,485 - GFF2900 0.65 -0.4 616,485 - GFF2900 0.65 -0.8 616,485 - GFF2900 0.65 +0.8 616,485 - GFF2900 0.65 -0.6 616,566 - GFF2900 0.74 +0.3 616,566 - GFF2900 0.74 -1.1 616,614 + GFF2900 0.80 +1.1 617,114 + GFF2901 0.23 +0.9 617,114 + GFF2901 0.23 -0.2 617,114 + GFF2901 0.23 -0.2 617,114 + GFF2901 0.23 +0.1 617,115 - GFF2901 0.23 +0.3 617,272 - GFF2901 0.34 -0.9 617,310 + GFF2901 0.37 -0.6 617,310 + GFF2901 0.37 +1.0 617,555 - GFF2901 0.55 -0.5
Or see this region's nucleotide sequence