Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF283 and GFF284 overlap by 4 nucleotides GFF284 and GFF285 are separated by 239 nucleotides GFF285 and GFF286 are separated by 125 nucleotides
GFF283 - Sarcosine oxidase subunit alpha, at 297,532 to 300,486
GFF283
GFF284 - Sarcosine oxidase subunit delta, at 300,483 to 300,767
GFF284
GFF285 - Sarcosine oxidase subunit beta, at 301,007 to 302,260
GFF285
GFF286 - HTH-type transcriptional regulator HdfR, at 302,386 to 303,348
GFF286
Position (kb) 301
302
303 Strain fitness (log2 ratio) -1
0
1 at 300.009 kb on - strand, within GFF283 at 300.009 kb on - strand, within GFF283 at 300.074 kb on + strand, within GFF283 at 300.075 kb on - strand, within GFF283 at 300.117 kb on - strand, within GFF283 at 300.117 kb on - strand, within GFF283 at 300.120 kb on - strand, within GFF283 at 300.335 kb on + strand at 300.336 kb on - strand at 300.394 kb on - strand at 300.413 kb on + strand at 300.414 kb on - strand at 300.598 kb on + strand, within GFF284 at 300.640 kb on + strand, within GFF284 at 300.641 kb on - strand, within GFF284 at 300.646 kb on + strand, within GFF284 at 300.646 kb on + strand, within GFF284 at 300.647 kb on - strand, within GFF284 at 300.756 kb on + strand at 301.167 kb on + strand, within GFF285 at 301.167 kb on + strand, within GFF285 at 301.265 kb on + strand, within GFF285 at 301.265 kb on + strand, within GFF285 at 301.266 kb on - strand, within GFF285 at 301.266 kb on - strand, within GFF285 at 301.294 kb on + strand, within GFF285 at 301.295 kb on - strand, within GFF285 at 301.354 kb on - strand, within GFF285 at 301.416 kb on + strand, within GFF285 at 301.417 kb on - strand, within GFF285 at 301.608 kb on - strand, within GFF285 at 301.692 kb on + strand, within GFF285 at 301.692 kb on + strand, within GFF285 at 301.692 kb on + strand, within GFF285 at 301.692 kb on + strand, within GFF285 at 301.692 kb on + strand, within GFF285 at 301.869 kb on + strand, within GFF285 at 301.870 kb on - strand, within GFF285 at 301.870 kb on - strand, within GFF285 at 301.870 kb on - strand, within GFF285 at 301.935 kb on + strand, within GFF285 at 301.936 kb on - strand, within GFF285 at 301.936 kb on - strand, within GFF285 at 301.936 kb on - strand, within GFF285 at 301.983 kb on + strand, within GFF285 at 301.984 kb on - strand, within GFF285 at 301.984 kb on - strand, within GFF285 at 302.011 kb on - strand, within GFF285 at 302.060 kb on - strand, within GFF285 at 302.112 kb on + strand, within GFF285 at 302.113 kb on - strand, within GFF285 at 302.113 kb on - strand, within GFF285 at 302.115 kb on + strand, within GFF285 at 302.115 kb on + strand, within GFF285 at 302.116 kb on - strand, within GFF285 at 302.164 kb on - strand at 302.164 kb on - strand at 302.164 kb on - strand at 302.336 kb on + strand at 302.336 kb on + strand at 302.336 kb on + strand at 302.337 kb on - strand at 302.359 kb on - strand at 302.359 kb on - strand at 302.362 kb on - strand at 302.374 kb on + strand at 302.899 kb on + strand, within GFF286 at 302.899 kb on + strand, within GFF286 at 302.899 kb on + strand, within GFF286 at 302.900 kb on - strand, within GFF286 at 303.175 kb on + strand, within GFF286
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 300,009 - GFF283 0.84 +0.9 300,009 - GFF283 0.84 -0.7 300,074 + GFF283 0.86 +0.0 300,075 - GFF283 0.86 -0.4 300,117 - GFF283 0.87 +0.4 300,117 - GFF283 0.87 -0.3 300,120 - GFF283 0.88 +0.0 300,335 + -0.2 300,336 - -0.4 300,394 - -1.0 300,413 + -0.1 300,414 - -0.1 300,598 + GFF284 0.40 +0.4 300,640 + GFF284 0.55 -0.6 300,641 - GFF284 0.55 +1.4 300,646 + GFF284 0.57 +0.8 300,646 + GFF284 0.57 -0.2 300,647 - GFF284 0.58 -0.4 300,756 + -0.9 301,167 + GFF285 0.13 -1.5 301,167 + GFF285 0.13 -0.5 301,265 + GFF285 0.21 +0.4 301,265 + GFF285 0.21 -0.3 301,266 - GFF285 0.21 -1.0 301,266 - GFF285 0.21 -0.2 301,294 + GFF285 0.23 -0.8 301,295 - GFF285 0.23 -0.6 301,354 - GFF285 0.28 +0.7 301,416 + GFF285 0.33 -0.1 301,417 - GFF285 0.33 +0.3 301,608 - GFF285 0.48 +0.6 301,692 + GFF285 0.55 +0.1 301,692 + GFF285 0.55 +0.4 301,692 + GFF285 0.55 -0.5 301,692 + GFF285 0.55 +0.5 301,692 + GFF285 0.55 +0.4 301,869 + GFF285 0.69 +0.3 301,870 - GFF285 0.69 +1.0 301,870 - GFF285 0.69 -0.2 301,870 - GFF285 0.69 -1.4 301,935 + GFF285 0.74 -0.2 301,936 - GFF285 0.74 +0.3 301,936 - GFF285 0.74 +1.5 301,936 - GFF285 0.74 -0.8 301,983 + GFF285 0.78 -0.7 301,984 - GFF285 0.78 -0.2 301,984 - GFF285 0.78 +0.8 302,011 - GFF285 0.80 +0.2 302,060 - GFF285 0.84 +0.5 302,112 + GFF285 0.88 -0.8 302,113 - GFF285 0.88 +0.6 302,113 - GFF285 0.88 -0.8 302,115 + GFF285 0.88 -0.3 302,115 + GFF285 0.88 +0.3 302,116 - GFF285 0.88 -0.3 302,164 - -0.1 302,164 - +0.5 302,164 - +0.9 302,336 + -0.4 302,336 + +0.3 302,336 + +0.0 302,337 - -0.2 302,359 - +0.0 302,359 - -1.1 302,362 - +0.2 302,374 + +0.2 302,899 + GFF286 0.53 -0.4 302,899 + GFF286 0.53 +0.7 302,899 + GFF286 0.53 -0.2 302,900 - GFF286 0.53 +1.2 303,175 + GFF286 0.82 -0.4
Or see this region's nucleotide sequence