Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2731 and GFF2732 are separated by 571 nucleotides GFF2732 and GFF2733 are separated by 177 nucleotides
GFF2731 - hypothetical protein, at 423,925 to 425,160
GFF2731
GFF2732 - hypothetical protein, at 425,732 to 427,702
GFF2732
GFF2733 - hypothetical protein, at 427,880 to 428,065
GFF2733
Position (kb) 425
426
427
428 Strain fitness (log2 ratio) -2
-1
0
1
2 at 424.750 kb on + strand, within GFF2731 at 424.752 kb on + strand, within GFF2731 at 424.752 kb on + strand, within GFF2731 at 424.752 kb on + strand, within GFF2731 at 424.752 kb on + strand, within GFF2731 at 424.752 kb on + strand, within GFF2731 at 424.753 kb on - strand, within GFF2731 at 424.753 kb on - strand, within GFF2731 at 424.850 kb on + strand, within GFF2731 at 424.850 kb on + strand, within GFF2731 at 424.850 kb on + strand, within GFF2731 at 424.850 kb on + strand, within GFF2731 at 424.851 kb on - strand, within GFF2731 at 424.851 kb on - strand, within GFF2731 at 425.039 kb on + strand at 425.039 kb on + strand at 425.039 kb on + strand at 425.039 kb on + strand at 425.039 kb on + strand at 425.040 kb on - strand at 425.040 kb on - strand at 425.040 kb on - strand at 425.040 kb on - strand at 425.040 kb on - strand at 425.105 kb on + strand at 425.105 kb on + strand at 425.105 kb on + strand at 425.106 kb on - strand at 425.106 kb on - strand at 425.106 kb on - strand at 425.106 kb on - strand at 425.155 kb on - strand at 425.195 kb on - strand at 425.205 kb on + strand at 425.206 kb on - strand at 425.262 kb on - strand at 425.284 kb on + strand at 425.287 kb on + strand at 425.333 kb on - strand at 425.333 kb on - strand at 425.336 kb on - strand at 425.336 kb on - strand at 425.336 kb on - strand at 425.388 kb on + strand at 425.388 kb on + strand at 425.389 kb on - strand at 425.389 kb on - strand at 425.389 kb on - strand at 425.450 kb on - strand at 425.504 kb on + strand at 425.505 kb on - strand at 425.505 kb on - strand at 425.513 kb on + strand at 425.534 kb on + strand at 425.534 kb on + strand at 425.534 kb on + strand at 425.534 kb on + strand at 425.535 kb on - strand at 425.535 kb on - strand at 425.535 kb on - strand at 425.535 kb on - strand at 425.535 kb on - strand at 425.535 kb on - strand at 425.535 kb on - strand at 425.733 kb on + strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.734 kb on - strand at 425.735 kb on + strand at 425.735 kb on + strand at 425.736 kb on - strand at 425.736 kb on - strand at 425.736 kb on - strand at 425.803 kb on + strand at 425.803 kb on + strand at 425.903 kb on + strand at 425.904 kb on - strand at 426.101 kb on + strand, within GFF2732 at 426.102 kb on - strand, within GFF2732 at 426.102 kb on - strand, within GFF2732 at 426.137 kb on + strand, within GFF2732 at 426.137 kb on + strand, within GFF2732 at 426.137 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.210 kb on + strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.211 kb on - strand, within GFF2732 at 426.567 kb on + strand, within GFF2732 at 426.567 kb on + strand, within GFF2732 at 426.567 kb on + strand, within GFF2732 at 426.567 kb on + strand, within GFF2732 at 426.567 kb on + strand, within GFF2732 at 426.568 kb on - strand, within GFF2732 at 426.568 kb on - strand, within GFF2732 at 426.568 kb on - strand, within GFF2732 at 426.568 kb on - strand, within GFF2732 at 426.568 kb on - strand, within GFF2732 at 426.568 kb on - strand, within GFF2732 at 426.731 kb on - strand, within GFF2732 at 426.731 kb on - strand, within GFF2732 at 426.731 kb on - strand, within GFF2732 at 426.731 kb on - strand, within GFF2732 at 426.731 kb on - strand, within GFF2732 at 426.738 kb on + strand, within GFF2732 at 426.738 kb on + strand, within GFF2732 at 426.738 kb on + strand, within GFF2732 at 426.739 kb on - strand, within GFF2732 at 426.739 kb on - strand, within GFF2732 at 426.739 kb on - strand, within GFF2732 at 426.739 kb on - strand, within GFF2732 at 426.739 kb on - strand, within GFF2732 at 426.739 kb on - strand, within GFF2732 at 426.867 kb on + strand, within GFF2732 at 426.867 kb on + strand, within GFF2732 at 426.867 kb on + strand, within GFF2732 at 426.868 kb on - strand, within GFF2732 at 426.868 kb on - strand, within GFF2732 at 426.868 kb on - strand, within GFF2732 at 426.868 kb on - strand, within GFF2732 at 426.874 kb on - strand, within GFF2732 at 426.874 kb on - strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.960 kb on + strand, within GFF2732 at 426.961 kb on - strand, within GFF2732 at 426.961 kb on - strand, within GFF2732 at 426.961 kb on - strand, within GFF2732 at 426.961 kb on - strand, within GFF2732 at 427.060 kb on - strand, within GFF2732 at 427.063 kb on + strand, within GFF2732 at 427.063 kb on + strand, within GFF2732 at 427.063 kb on + strand, within GFF2732 at 427.063 kb on + strand, within GFF2732 at 427.064 kb on - strand, within GFF2732 at 427.064 kb on - strand, within GFF2732 at 427.144 kb on + strand, within GFF2732 at 427.150 kb on - strand, within GFF2732 at 427.150 kb on - strand, within GFF2732 at 427.191 kb on + strand, within GFF2732 at 427.191 kb on + strand, within GFF2732 at 427.192 kb on - strand, within GFF2732 at 427.192 kb on - strand, within GFF2732 at 427.194 kb on + strand, within GFF2732 at 427.194 kb on + strand, within GFF2732 at 427.194 kb on + strand, within GFF2732 at 427.195 kb on - strand, within GFF2732 at 427.195 kb on - strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.275 kb on + strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.276 kb on - strand, within GFF2732 at 427.400 kb on + strand, within GFF2732 at 427.401 kb on - strand, within GFF2732 at 427.401 kb on - strand, within GFF2732 at 427.407 kb on + strand, within GFF2732 at 427.439 kb on + strand, within GFF2732 at 427.491 kb on + strand, within GFF2732 at 427.527 kb on + strand at 427.580 kb on + strand at 427.580 kb on + strand at 427.580 kb on + strand at 427.581 kb on - strand at 427.581 kb on - strand at 427.581 kb on - strand at 427.751 kb on + strand at 427.752 kb on - strand at 427.802 kb on - strand at 427.802 kb on - strand at 427.881 kb on + strand at 427.881 kb on + strand at 427.881 kb on + strand at 427.881 kb on + strand at 427.882 kb on - strand at 427.882 kb on - strand at 427.882 kb on - strand at 427.960 kb on - strand, within GFF2733 at 428.239 kb on + strand at 428.240 kb on - strand at 428.240 kb on - strand at 428.240 kb on - strand at 428.290 kb on + strand at 428.291 kb on - strand at 428.291 kb on - strand at 428.353 kb on - strand at 428.353 kb on - strand at 428.427 kb on + strand at 428.427 kb on + strand at 428.427 kb on + strand at 428.427 kb on + strand at 428.427 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.476 kb on + strand at 428.477 kb on - strand at 428.477 kb on - strand at 428.477 kb on - strand at 428.477 kb on - strand at 428.477 kb on - strand at 428.477 kb on - strand at 428.513 kb on + strand at 428.513 kb on + strand at 428.514 kb on - strand at 428.514 kb on - strand at 428.608 kb on + strand at 428.608 kb on + strand at 428.608 kb on + strand at 428.701 kb on + strand at 428.701 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 424,750 + GFF2731 0.67 -0.9 424,752 + GFF2731 0.67 +0.6 424,752 + GFF2731 0.67 -0.4 424,752 + GFF2731 0.67 +0.5 424,752 + GFF2731 0.67 -0.1 424,752 + GFF2731 0.67 +1.0 424,753 - GFF2731 0.67 +0.7 424,753 - GFF2731 0.67 +1.1 424,850 + GFF2731 0.75 -0.7 424,850 + GFF2731 0.75 -0.2 424,850 + GFF2731 0.75 +0.3 424,850 + GFF2731 0.75 -0.0 424,851 - GFF2731 0.75 -1.2 424,851 - GFF2731 0.75 +0.1 425,039 + -0.4 425,039 + +0.3 425,039 + -0.7 425,039 + +0.3 425,039 + +1.3 425,040 - -0.3 425,040 - -0.4 425,040 - +0.1 425,040 - -0.1 425,040 - -0.1 425,105 + -1.5 425,105 + +0.4 425,105 + +0.0 425,106 - -0.2 425,106 - +0.3 425,106 - +0.3 425,106 - +0.9 425,155 - -0.2 425,195 - +0.1 425,205 + +0.7 425,206 - -2.1 425,262 - -0.1 425,284 + +0.8 425,287 + +0.0 425,333 - -0.6 425,333 - +0.9 425,336 - +0.0 425,336 - -0.4 425,336 - -1.2 425,388 + +0.3 425,388 + -0.8 425,389 - +0.0 425,389 - +1.1 425,389 - -0.5 425,450 - +0.7 425,504 + +0.4 425,505 - -0.3 425,505 - +1.0 425,513 + +0.6 425,534 + -1.4 425,534 + +0.6 425,534 + -0.4 425,534 + +0.6 425,535 - +0.2 425,535 - +1.0 425,535 - +0.9 425,535 - +0.6 425,535 - +0.1 425,535 - +0.7 425,535 - -0.3 425,733 + +0.1 425,734 - -0.0 425,734 - -0.1 425,734 - -0.0 425,734 - +0.4 425,734 - +0.4 425,734 - -1.1 425,734 - -0.7 425,734 - +0.0 425,735 + +0.3 425,735 + +1.1 425,736 - +0.2 425,736 - -0.3 425,736 - +0.1 425,803 + +0.3 425,803 + -0.2 425,903 + -0.7 425,904 - +0.3 426,101 + GFF2732 0.19 +0.1 426,102 - GFF2732 0.19 +0.5 426,102 - GFF2732 0.19 +0.3 426,137 + GFF2732 0.21 +0.9 426,137 + GFF2732 0.21 +0.9 426,137 + GFF2732 0.21 -0.5 426,210 + GFF2732 0.24 -0.4 426,210 + GFF2732 0.24 -0.4 426,210 + GFF2732 0.24 -0.6 426,210 + GFF2732 0.24 +0.1 426,210 + GFF2732 0.24 +0.2 426,210 + GFF2732 0.24 +0.4 426,210 + GFF2732 0.24 +0.1 426,210 + GFF2732 0.24 -0.4 426,210 + GFF2732 0.24 +0.3 426,210 + GFF2732 0.24 +0.1 426,211 - GFF2732 0.24 +0.3 426,211 - GFF2732 0.24 +0.0 426,211 - GFF2732 0.24 +1.4 426,211 - GFF2732 0.24 +0.4 426,211 - GFF2732 0.24 -0.3 426,211 - GFF2732 0.24 -0.5 426,211 - GFF2732 0.24 +0.2 426,567 + GFF2732 0.42 +0.3 426,567 + GFF2732 0.42 -1.1 426,567 + GFF2732 0.42 +1.5 426,567 + GFF2732 0.42 -0.1 426,567 + GFF2732 0.42 -1.6 426,568 - GFF2732 0.42 -0.6 426,568 - GFF2732 0.42 -0.7 426,568 - GFF2732 0.42 -0.7 426,568 - GFF2732 0.42 -0.1 426,568 - GFF2732 0.42 -0.2 426,568 - GFF2732 0.42 +0.5 426,731 - GFF2732 0.51 -0.4 426,731 - GFF2732 0.51 -0.6 426,731 - GFF2732 0.51 +0.6 426,731 - GFF2732 0.51 -0.7 426,731 - GFF2732 0.51 -0.4 426,738 + GFF2732 0.51 -0.9 426,738 + GFF2732 0.51 -0.4 426,738 + GFF2732 0.51 -0.7 426,739 - GFF2732 0.51 -0.9 426,739 - GFF2732 0.51 -0.2 426,739 - GFF2732 0.51 -0.5 426,739 - GFF2732 0.51 -0.5 426,739 - GFF2732 0.51 +0.3 426,739 - GFF2732 0.51 -0.6 426,867 + GFF2732 0.58 -0.0 426,867 + GFF2732 0.58 -0.5 426,867 + GFF2732 0.58 +0.3 426,868 - GFF2732 0.58 +0.4 426,868 - GFF2732 0.58 -0.5 426,868 - GFF2732 0.58 +0.2 426,868 - GFF2732 0.58 +0.2 426,874 - GFF2732 0.58 -1.6 426,874 - GFF2732 0.58 +1.3 426,960 + GFF2732 0.62 -0.3 426,960 + GFF2732 0.62 -0.4 426,960 + GFF2732 0.62 -0.0 426,960 + GFF2732 0.62 +0.3 426,960 + GFF2732 0.62 -0.3 426,960 + GFF2732 0.62 +0.9 426,960 + GFF2732 0.62 -0.5 426,961 - GFF2732 0.62 +1.0 426,961 - GFF2732 0.62 -0.1 426,961 - GFF2732 0.62 +0.4 426,961 - GFF2732 0.62 -0.5 427,060 - GFF2732 0.67 +0.2 427,063 + GFF2732 0.68 -0.4 427,063 + GFF2732 0.68 +0.9 427,063 + GFF2732 0.68 -0.3 427,063 + GFF2732 0.68 -0.2 427,064 - GFF2732 0.68 -1.7 427,064 - GFF2732 0.68 +0.1 427,144 + GFF2732 0.72 +0.5 427,150 - GFF2732 0.72 +0.2 427,150 - GFF2732 0.72 -0.1 427,191 + GFF2732 0.74 -0.0 427,191 + GFF2732 0.74 -0.3 427,192 - GFF2732 0.74 +0.5 427,192 - GFF2732 0.74 -0.2 427,194 + GFF2732 0.74 -0.7 427,194 + GFF2732 0.74 +0.2 427,194 + GFF2732 0.74 +0.4 427,195 - GFF2732 0.74 -0.5 427,195 - GFF2732 0.74 +0.2 427,275 + GFF2732 0.78 +1.1 427,275 + GFF2732 0.78 -0.6 427,275 + GFF2732 0.78 -0.0 427,275 + GFF2732 0.78 -0.4 427,275 + GFF2732 0.78 +0.8 427,275 + GFF2732 0.78 +0.1 427,275 + GFF2732 0.78 -0.3 427,275 + GFF2732 0.78 -0.9 427,275 + GFF2732 0.78 +0.1 427,275 + GFF2732 0.78 -0.8 427,275 + GFF2732 0.78 -0.4 427,275 + GFF2732 0.78 -0.8 427,275 + GFF2732 0.78 -0.8 427,276 - GFF2732 0.78 -0.1 427,276 - GFF2732 0.78 +0.5 427,276 - GFF2732 0.78 +0.7 427,276 - GFF2732 0.78 +0.6 427,276 - GFF2732 0.78 -0.5 427,276 - GFF2732 0.78 +0.1 427,276 - GFF2732 0.78 -0.5 427,400 + GFF2732 0.85 +1.0 427,401 - GFF2732 0.85 +1.5 427,401 - GFF2732 0.85 -1.3 427,407 + GFF2732 0.85 -0.7 427,439 + GFF2732 0.87 -1.0 427,491 + GFF2732 0.89 -0.1 427,527 + +0.5 427,580 + -0.2 427,580 + -1.3 427,580 + +1.3 427,581 - +0.1 427,581 - +0.9 427,581 - +0.3 427,751 + +0.2 427,752 - +0.9 427,802 - -0.1 427,802 - -0.3 427,881 + -0.3 427,881 + +0.4 427,881 + +0.4 427,881 + +1.2 427,882 - -0.5 427,882 - -0.3 427,882 - -0.5 427,960 - GFF2733 0.43 +0.1 428,239 + +0.4 428,240 - +0.1 428,240 - -1.7 428,240 - -0.1 428,290 + -1.1 428,291 - -0.2 428,291 - -0.2 428,353 - -1.3 428,353 - -0.5 428,427 + -0.8 428,427 + +1.0 428,427 + +0.6 428,427 + -0.6 428,427 + -0.1 428,476 + -0.3 428,476 + +0.3 428,476 + +0.3 428,476 + -0.2 428,476 + -1.0 428,476 + -0.9 428,476 + -0.4 428,476 + -0.3 428,476 + -0.9 428,477 - +1.2 428,477 - +0.7 428,477 - +0.8 428,477 - +0.0 428,477 - -0.2 428,477 - +0.3 428,513 + -0.1 428,513 + +0.2 428,514 - +0.9 428,514 - +1.9 428,608 + -0.1 428,608 + -2.4 428,608 + -0.3 428,701 + +0.2 428,701 + +0.0
Or see this region's nucleotide sequence