Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2708 and GFF2709 overlap by 4 nucleotides GFF2709 and GFF2710 overlap by 4 nucleotides
GFF2708 - Iron(3+)-hydroxamate import system permease protein FhuB, at 397,847 to 399,874
GFF2708
GFF2709 - ABC transporter ATP-binding/permease protein YojI, at 399,871 to 401,556
GFF2709
GFF2710 - Iron(3+)-hydroxamate import ATP-binding protein FhuC, at 401,553 to 402,341
GFF2710
Position (kb) 399
400
401
402 Strain fitness (log2 ratio) -2
-1
0
1
2 at 399.013 kb on + strand, within GFF2708 at 399.013 kb on + strand, within GFF2708 at 399.014 kb on - strand, within GFF2708 at 399.267 kb on + strand, within GFF2708 at 399.267 kb on + strand, within GFF2708 at 399.267 kb on + strand, within GFF2708 at 399.267 kb on + strand, within GFF2708 at 399.268 kb on - strand, within GFF2708 at 399.268 kb on - strand, within GFF2708 at 399.268 kb on - strand, within GFF2708 at 399.681 kb on + strand at 399.682 kb on - strand at 399.682 kb on - strand at 399.682 kb on - strand at 399.828 kb on - strand at 399.928 kb on - strand at 399.928 kb on - strand at 400.210 kb on + strand, within GFF2709 at 400.210 kb on + strand, within GFF2709 at 400.211 kb on - strand, within GFF2709 at 400.288 kb on + strand, within GFF2709 at 400.288 kb on + strand, within GFF2709 at 400.288 kb on + strand, within GFF2709 at 400.288 kb on + strand, within GFF2709 at 400.289 kb on - strand, within GFF2709 at 400.289 kb on - strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.322 kb on + strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.323 kb on - strand, within GFF2709 at 400.327 kb on + strand, within GFF2709 at 400.327 kb on + strand, within GFF2709 at 400.327 kb on + strand, within GFF2709 at 400.327 kb on + strand, within GFF2709 at 400.327 kb on + strand, within GFF2709 at 400.370 kb on + strand, within GFF2709 at 400.371 kb on - strand, within GFF2709 at 400.371 kb on - strand, within GFF2709 at 400.371 kb on - strand, within GFF2709 at 400.429 kb on + strand, within GFF2709 at 400.429 kb on + strand, within GFF2709 at 400.429 kb on + strand, within GFF2709 at 400.429 kb on + strand, within GFF2709 at 400.429 kb on + strand, within GFF2709 at 400.429 kb on + strand, within GFF2709 at 400.430 kb on - strand, within GFF2709 at 400.430 kb on - strand, within GFF2709 at 400.472 kb on - strand, within GFF2709 at 400.472 kb on - strand, within GFF2709 at 400.482 kb on + strand, within GFF2709 at 400.532 kb on + strand, within GFF2709 at 400.533 kb on - strand, within GFF2709 at 400.600 kb on + strand, within GFF2709 at 400.600 kb on + strand, within GFF2709 at 400.600 kb on + strand, within GFF2709 at 400.601 kb on - strand, within GFF2709 at 400.601 kb on - strand, within GFF2709 at 400.638 kb on + strand, within GFF2709 at 400.639 kb on - strand, within GFF2709 at 400.682 kb on + strand, within GFF2709 at 400.683 kb on - strand, within GFF2709 at 400.683 kb on - strand, within GFF2709 at 400.683 kb on - strand, within GFF2709 at 400.723 kb on + strand, within GFF2709 at 400.724 kb on - strand, within GFF2709 at 400.724 kb on - strand, within GFF2709 at 400.724 kb on - strand, within GFF2709 at 400.797 kb on + strand, within GFF2709 at 400.797 kb on + strand, within GFF2709 at 400.797 kb on + strand, within GFF2709 at 400.797 kb on + strand, within GFF2709 at 400.797 kb on + strand, within GFF2709 at 400.798 kb on - strand, within GFF2709 at 400.798 kb on - strand, within GFF2709 at 400.798 kb on - strand, within GFF2709 at 400.866 kb on - strand, within GFF2709 at 400.888 kb on - strand, within GFF2709 at 400.888 kb on - strand, within GFF2709 at 400.909 kb on + strand, within GFF2709 at 400.909 kb on + strand, within GFF2709 at 400.909 kb on + strand, within GFF2709 at 400.909 kb on + strand, within GFF2709 at 401.051 kb on - strand, within GFF2709 at 401.119 kb on - strand, within GFF2709 at 401.149 kb on + strand, within GFF2709 at 401.149 kb on + strand, within GFF2709 at 401.149 kb on + strand, within GFF2709 at 401.150 kb on - strand, within GFF2709 at 401.150 kb on - strand, within GFF2709 at 401.150 kb on - strand, within GFF2709 at 401.386 kb on + strand, within GFF2709 at 401.465 kb on + strand at 401.466 kb on - strand at 401.529 kb on + strand at 401.530 kb on - strand at 401.598 kb on + strand at 401.598 kb on + strand at 401.598 kb on + strand at 401.598 kb on + strand at 401.599 kb on - strand at 401.599 kb on - strand at 401.599 kb on - strand at 401.599 kb on - strand at 401.599 kb on - strand at 401.643 kb on - strand, within GFF2710 at 401.696 kb on + strand, within GFF2710 at 401.696 kb on + strand, within GFF2710 at 401.696 kb on + strand, within GFF2710 at 401.696 kb on + strand, within GFF2710 at 401.696 kb on + strand, within GFF2710 at 401.696 kb on + strand, within GFF2710 at 401.697 kb on - strand, within GFF2710 at 401.697 kb on - strand, within GFF2710 at 401.697 kb on - strand, within GFF2710 at 401.697 kb on - strand, within GFF2710 at 401.808 kb on + strand, within GFF2710 at 401.809 kb on - strand, within GFF2710 at 401.809 kb on - strand, within GFF2710 at 401.809 kb on - strand, within GFF2710 at 401.809 kb on - strand, within GFF2710 at 401.874 kb on + strand, within GFF2710 at 401.951 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.082 kb on + strand, within GFF2710 at 402.083 kb on - strand, within GFF2710 at 402.083 kb on - strand, within GFF2710 at 402.083 kb on - strand, within GFF2710 at 402.083 kb on - strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.148 kb on + strand, within GFF2710 at 402.149 kb on - strand, within GFF2710 at 402.149 kb on - strand, within GFF2710 at 402.149 kb on - strand, within GFF2710 at 402.245 kb on + strand, within GFF2710 at 402.246 kb on - strand, within GFF2710 at 402.246 kb on - strand, within GFF2710 at 402.276 kb on + strand at 402.276 kb on + strand at 402.277 kb on - strand at 402.277 kb on - strand at 402.283 kb on + strand at 402.283 kb on + strand at 402.284 kb on - strand at 402.367 kb on + strand at 402.367 kb on + strand at 402.367 kb on + strand at 402.367 kb on + strand at 402.367 kb on + strand at 402.367 kb on + strand at 402.368 kb on - strand at 402.368 kb on - strand at 402.368 kb on - strand at 402.368 kb on - strand at 402.368 kb on - strand at 402.380 kb on + strand at 402.381 kb on - strand at 402.381 kb on - strand at 402.381 kb on - strand at 402.438 kb on + strand at 402.439 kb on - strand at 402.450 kb on - strand at 402.502 kb on + strand at 402.502 kb on + strand at 402.503 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 399,013 + GFF2708 0.57 +0.3 399,013 + GFF2708 0.57 -0.1 399,014 - GFF2708 0.58 +0.1 399,267 + GFF2708 0.70 -0.4 399,267 + GFF2708 0.70 -0.4 399,267 + GFF2708 0.70 -0.6 399,267 + GFF2708 0.70 -0.4 399,268 - GFF2708 0.70 +0.3 399,268 - GFF2708 0.70 +0.3 399,268 - GFF2708 0.70 +0.6 399,681 + -0.1 399,682 - -1.0 399,682 - +1.1 399,682 - -0.0 399,828 - +0.4 399,928 - +1.0 399,928 - -0.3 400,210 + GFF2709 0.20 +0.1 400,210 + GFF2709 0.20 -1.7 400,211 - GFF2709 0.20 -0.1 400,288 + GFF2709 0.25 -0.4 400,288 + GFF2709 0.25 -0.6 400,288 + GFF2709 0.25 +0.1 400,288 + GFF2709 0.25 +0.2 400,289 - GFF2709 0.25 -0.8 400,289 - GFF2709 0.25 +0.1 400,322 + GFF2709 0.27 +1.1 400,322 + GFF2709 0.27 +0.1 400,322 + GFF2709 0.27 -0.1 400,322 + GFF2709 0.27 +0.2 400,322 + GFF2709 0.27 -0.1 400,322 + GFF2709 0.27 -0.5 400,322 + GFF2709 0.27 -0.1 400,322 + GFF2709 0.27 +0.3 400,322 + GFF2709 0.27 +1.6 400,322 + GFF2709 0.27 -0.7 400,322 + GFF2709 0.27 -0.1 400,322 + GFF2709 0.27 +0.1 400,322 + GFF2709 0.27 +0.3 400,323 - GFF2709 0.27 +0.1 400,323 - GFF2709 0.27 -0.6 400,323 - GFF2709 0.27 -0.2 400,323 - GFF2709 0.27 +0.0 400,323 - GFF2709 0.27 +0.0 400,323 - GFF2709 0.27 -0.6 400,323 - GFF2709 0.27 -0.0 400,323 - GFF2709 0.27 +0.6 400,323 - GFF2709 0.27 -0.1 400,327 + GFF2709 0.27 +0.9 400,327 + GFF2709 0.27 -0.0 400,327 + GFF2709 0.27 +0.3 400,327 + GFF2709 0.27 +0.7 400,327 + GFF2709 0.27 -0.6 400,370 + GFF2709 0.30 +0.3 400,371 - GFF2709 0.30 -1.3 400,371 - GFF2709 0.30 +0.5 400,371 - GFF2709 0.30 +1.3 400,429 + GFF2709 0.33 -0.3 400,429 + GFF2709 0.33 +0.2 400,429 + GFF2709 0.33 -0.1 400,429 + GFF2709 0.33 +0.1 400,429 + GFF2709 0.33 +1.1 400,429 + GFF2709 0.33 -1.1 400,430 - GFF2709 0.33 +1.4 400,430 - GFF2709 0.33 -0.6 400,472 - GFF2709 0.36 -0.3 400,472 - GFF2709 0.36 -1.6 400,482 + GFF2709 0.36 -1.1 400,532 + GFF2709 0.39 -2.7 400,533 - GFF2709 0.39 +1.2 400,600 + GFF2709 0.43 +0.8 400,600 + GFF2709 0.43 +1.1 400,600 + GFF2709 0.43 +0.7 400,601 - GFF2709 0.43 +0.4 400,601 - GFF2709 0.43 -0.4 400,638 + GFF2709 0.45 -0.4 400,639 - GFF2709 0.46 -0.7 400,682 + GFF2709 0.48 -0.3 400,683 - GFF2709 0.48 +0.1 400,683 - GFF2709 0.48 +0.2 400,683 - GFF2709 0.48 -0.2 400,723 + GFF2709 0.51 -0.8 400,724 - GFF2709 0.51 +0.5 400,724 - GFF2709 0.51 +0.2 400,724 - GFF2709 0.51 -0.4 400,797 + GFF2709 0.55 +0.0 400,797 + GFF2709 0.55 +0.2 400,797 + GFF2709 0.55 -0.6 400,797 + GFF2709 0.55 -0.1 400,797 + GFF2709 0.55 +0.4 400,798 - GFF2709 0.55 +0.5 400,798 - GFF2709 0.55 -1.3 400,798 - GFF2709 0.55 +1.2 400,866 - GFF2709 0.59 +0.3 400,888 - GFF2709 0.60 -0.7 400,888 - GFF2709 0.60 -1.9 400,909 + GFF2709 0.62 +0.2 400,909 + GFF2709 0.62 -0.1 400,909 + GFF2709 0.62 +0.5 400,909 + GFF2709 0.62 -1.7 401,051 - GFF2709 0.70 -0.1 401,119 - GFF2709 0.74 -0.9 401,149 + GFF2709 0.76 -0.8 401,149 + GFF2709 0.76 -0.7 401,149 + GFF2709 0.76 +0.0 401,150 - GFF2709 0.76 -0.1 401,150 - GFF2709 0.76 +0.1 401,150 - GFF2709 0.76 -0.0 401,386 + GFF2709 0.90 +0.2 401,465 + +0.5 401,466 - +1.0 401,529 + -2.1 401,530 - -1.0 401,598 + +0.4 401,598 + +0.4 401,598 + -0.5 401,598 + +0.3 401,599 - +0.0 401,599 - +0.2 401,599 - +0.2 401,599 - +0.6 401,599 - -0.2 401,643 - GFF2710 0.11 +1.8 401,696 + GFF2710 0.18 +0.3 401,696 + GFF2710 0.18 +0.4 401,696 + GFF2710 0.18 -0.3 401,696 + GFF2710 0.18 -0.7 401,696 + GFF2710 0.18 +0.9 401,696 + GFF2710 0.18 +1.0 401,697 - GFF2710 0.18 -0.6 401,697 - GFF2710 0.18 -0.7 401,697 - GFF2710 0.18 -0.9 401,697 - GFF2710 0.18 -0.3 401,808 + GFF2710 0.32 -1.3 401,809 - GFF2710 0.32 -0.4 401,809 - GFF2710 0.32 -0.7 401,809 - GFF2710 0.32 -0.7 401,809 - GFF2710 0.32 +0.5 401,874 + GFF2710 0.41 +0.0 401,951 + GFF2710 0.50 -0.4 402,082 + GFF2710 0.67 +0.4 402,082 + GFF2710 0.67 +2.1 402,082 + GFF2710 0.67 -0.7 402,082 + GFF2710 0.67 +0.1 402,082 + GFF2710 0.67 +1.2 402,082 + GFF2710 0.67 -0.1 402,082 + GFF2710 0.67 -0.1 402,082 + GFF2710 0.67 +0.5 402,083 - GFF2710 0.67 -0.7 402,083 - GFF2710 0.67 -0.9 402,083 - GFF2710 0.67 -1.9 402,083 - GFF2710 0.67 -0.4 402,148 + GFF2710 0.75 +0.3 402,148 + GFF2710 0.75 -1.3 402,148 + GFF2710 0.75 +0.1 402,148 + GFF2710 0.75 +1.7 402,148 + GFF2710 0.75 +0.6 402,148 + GFF2710 0.75 -0.3 402,148 + GFF2710 0.75 -0.1 402,148 + GFF2710 0.75 +0.4 402,148 + GFF2710 0.75 +0.6 402,149 - GFF2710 0.76 -0.6 402,149 - GFF2710 0.76 -0.8 402,149 - GFF2710 0.76 +0.2 402,245 + GFF2710 0.88 +1.1 402,246 - GFF2710 0.88 -0.0 402,246 - GFF2710 0.88 +0.6 402,276 + +0.2 402,276 + -0.5 402,277 - +0.9 402,277 - -0.3 402,283 + +0.9 402,283 + -0.4 402,284 - +0.4 402,367 + -0.3 402,367 + -0.7 402,367 + +0.1 402,367 + -0.9 402,367 + +0.6 402,367 + -0.5 402,368 - +0.1 402,368 - +0.3 402,368 - -0.1 402,368 - -0.3 402,368 - -0.8 402,380 + +0.1 402,381 - +1.1 402,381 - +0.7 402,381 - +0.9 402,438 + +0.5 402,439 - -1.4 402,450 - +0.2 402,502 + -0.6 402,502 + +0.7 402,503 - +0.4
Or see this region's nucleotide sequence