Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2428 and GFF2429 are separated by 157 nucleotides GFF2429 and GFF2430 are separated by 120 nucleotides GFF2430 and GFF2431 are separated by 165 nucleotides GFF2431 and GFF2432 are separated by 111 nucleotides
GFF2428 - 30S ribosomal protein S1, at 85,891 to 87,609
GFF2428
GFF2429 - hypothetical protein, at 87,767 to 88,171
GFF2429
GFF2430 - Carbonic anhydrase, at 88,292 to 89,044
GFF2430
GFF2431 - Thiamine-phosphate synthase, at 89,210 to 89,734
GFF2431
GFF2432 - Thiazole synthase, at 89,846 to 90,637
GFF2432
Position (kb) 88
89
90 Strain fitness (log2 ratio) -1
0
1
2 at 87.734 kb on - strand at 87.867 kb on - strand, within GFF2429 at 87.867 kb on - strand, within GFF2429 at 88.174 kb on + strand at 88.174 kb on + strand at 88.246 kb on - strand at 88.467 kb on + strand, within GFF2430 at 88.467 kb on + strand, within GFF2430 at 88.468 kb on - strand, within GFF2430 at 88.719 kb on + strand, within GFF2430 at 88.719 kb on + strand, within GFF2430 at 88.719 kb on + strand, within GFF2430 at 88.720 kb on - strand, within GFF2430 at 88.720 kb on - strand, within GFF2430 at 88.720 kb on - strand, within GFF2430 at 88.720 kb on - strand, within GFF2430 at 88.787 kb on - strand, within GFF2430 at 88.800 kb on + strand, within GFF2430 at 88.801 kb on - strand, within GFF2430 at 88.950 kb on + strand, within GFF2430 at 88.950 kb on + strand, within GFF2430 at 88.950 kb on + strand, within GFF2430 at 88.950 kb on + strand, within GFF2430 at 88.951 kb on - strand, within GFF2430 at 88.951 kb on - strand, within GFF2430 at 88.951 kb on - strand, within GFF2430 at 88.951 kb on - strand, within GFF2430 at 88.951 kb on - strand, within GFF2430 at 89.044 kb on + strand at 89.044 kb on + strand at 89.044 kb on + strand at 89.044 kb on + strand at 89.044 kb on + strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.045 kb on - strand at 89.163 kb on + strand at 89.163 kb on + strand at 89.164 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 87,734 - -0.7 87,867 - GFF2429 0.25 -0.7 87,867 - GFF2429 0.25 -0.0 88,174 + -0.3 88,174 + +0.0 88,246 - +2.2 88,467 + GFF2430 0.23 -0.5 88,467 + GFF2430 0.23 +0.0 88,468 - GFF2430 0.23 +0.2 88,719 + GFF2430 0.57 +0.5 88,719 + GFF2430 0.57 -0.4 88,719 + GFF2430 0.57 +0.3 88,720 - GFF2430 0.57 +1.5 88,720 - GFF2430 0.57 +0.4 88,720 - GFF2430 0.57 +0.2 88,720 - GFF2430 0.57 -0.1 88,787 - GFF2430 0.66 -0.7 88,800 + GFF2430 0.67 +0.2 88,801 - GFF2430 0.68 +0.1 88,950 + GFF2430 0.87 +0.9 88,950 + GFF2430 0.87 -0.4 88,950 + GFF2430 0.87 +0.3 88,950 + GFF2430 0.87 -0.4 88,951 - GFF2430 0.88 -0.3 88,951 - GFF2430 0.88 -0.5 88,951 - GFF2430 0.88 -0.5 88,951 - GFF2430 0.88 +0.0 88,951 - GFF2430 0.88 -0.8 89,044 + -1.4 89,044 + +0.5 89,044 + -1.0 89,044 + +0.3 89,044 + -1.0 89,045 - +0.6 89,045 - +0.3 89,045 - +0.1 89,045 - +0.4 89,045 - +0.7 89,045 - +0.8 89,045 - -0.0 89,045 - -0.1 89,045 - +0.7 89,163 + +0.4 89,163 + -0.3 89,164 - +1.7
Or see this region's nucleotide sequence