Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2217 and GFF2218 are separated by 1 nucleotides GFF2218 and GFF2219 are separated by 220 nucleotides GFF2219 and GFF2220 are separated by 75 nucleotides
GFF2217 - Ribosome-associated ATPase, at 921,696 to 924,425
GFF2217
GFF2218 - Inner membrane transport permease YhhJ, at 924,427 to 925,593
GFF2218
GFF2219 - HTH-type transcriptional regulator CymR, at 925,814 to 926,260
GFF2219
GFF2220 - Intracellular septation protein, at 926,336 to 926,935
GFF2220
Position (kb) 924
925
926 Strain fitness (log2 ratio) -2
-1
0
1 at 923.501 kb on + strand, within GFF2217 at 923.704 kb on + strand, within GFF2217 at 923.705 kb on - strand, within GFF2217 at 923.712 kb on + strand, within GFF2217 at 923.712 kb on + strand, within GFF2217 at 923.712 kb on + strand, within GFF2217 at 923.713 kb on - strand, within GFF2217 at 923.713 kb on - strand, within GFF2217 at 923.772 kb on + strand, within GFF2217 at 923.772 kb on + strand, within GFF2217 at 923.808 kb on + strand, within GFF2217 at 923.853 kb on - strand, within GFF2217 at 923.853 kb on - strand, within GFF2217 at 923.940 kb on + strand, within GFF2217 at 923.940 kb on + strand, within GFF2217 at 923.941 kb on - strand, within GFF2217 at 923.941 kb on - strand, within GFF2217 at 924.102 kb on + strand, within GFF2217 at 924.285 kb on + strand at 924.286 kb on - strand at 925.264 kb on + strand, within GFF2218 at 925.264 kb on + strand, within GFF2218 at 925.474 kb on + strand, within GFF2218 at 925.500 kb on - strand at 925.500 kb on - strand at 925.821 kb on + strand at 925.821 kb on + strand at 925.821 kb on + strand at 925.822 kb on - strand at 926.282 kb on - strand at 926.292 kb on - strand at 926.318 kb on - strand at 926.318 kb on - strand at 926.347 kb on + strand at 926.347 kb on + strand at 926.348 kb on - strand at 926.348 kb on - strand at 926.555 kb on + strand, within GFF2220 at 926.556 kb on - strand, within GFF2220 at 926.556 kb on - strand, within GFF2220
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 923,501 + GFF2217 0.66 -0.3 923,704 + GFF2217 0.74 +1.0 923,705 - GFF2217 0.74 +0.3 923,712 + GFF2217 0.74 +0.1 923,712 + GFF2217 0.74 +0.4 923,712 + GFF2217 0.74 -1.4 923,713 - GFF2217 0.74 -0.5 923,713 - GFF2217 0.74 -0.3 923,772 + GFF2217 0.76 -1.1 923,772 + GFF2217 0.76 -0.1 923,808 + GFF2217 0.77 -1.2 923,853 - GFF2217 0.79 +0.5 923,853 - GFF2217 0.79 +1.6 923,940 + GFF2217 0.82 -0.3 923,940 + GFF2217 0.82 -0.5 923,941 - GFF2217 0.82 +0.8 923,941 - GFF2217 0.82 -0.7 924,102 + GFF2217 0.88 -0.4 924,285 + -0.6 924,286 - -0.9 925,264 + GFF2218 0.72 -0.4 925,264 + GFF2218 0.72 -0.2 925,474 + GFF2218 0.90 -0.1 925,500 - +0.2 925,500 - -0.2 925,821 + -1.0 925,821 + -1.6 925,821 + -1.8 925,822 - -0.5 926,282 - +0.0 926,292 - -0.1 926,318 - -0.4 926,318 - -0.4 926,347 + -1.5 926,347 + -1.0 926,348 - +0.3 926,348 - -0.8 926,555 + GFF2220 0.36 -0.8 926,556 - GFF2220 0.37 -1.0 926,556 - GFF2220 0.37 -0.3
Or see this region's nucleotide sequence