Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2184 and GFF2185 overlap by 29 nucleotides GFF2185 and GFF2186 overlap by 1 nucleotides GFF2186 and GFF2187 are separated by 53 nucleotides GFF2187 and GFF2188 overlap by 11 nucleotides GFF2188 and GFF2189 are separated by 13 nucleotides
GFF2184 - hypothetical protein, at 882,266 to 883,420
GFF2184
GFF2185 - hypothetical protein, at 883,392 to 883,733
GFF2185
GFF2186 - hypothetical protein, at 883,733 to 883,942
GFF2186
GFF2187 - hypothetical protein, at 883,996 to 884,715
GFF2187
GFF2188 - hypothetical protein, at 884,705 to 884,824
GFF2188
GFF2189 - hypothetical protein, at 884,838 to 885,668
GFF2189
Position (kb) 883
884
885 Strain fitness (log2 ratio) -1
0
1
2
3 at 883.115 kb on + strand, within GFF2184 at 883.115 kb on + strand, within GFF2184 at 883.116 kb on - strand, within GFF2184 at 883.508 kb on + strand, within GFF2185 at 883.509 kb on - strand, within GFF2185 at 883.575 kb on + strand, within GFF2185 at 883.576 kb on - strand, within GFF2185 at 883.576 kb on - strand, within GFF2185 at 883.647 kb on + strand, within GFF2185 at 883.648 kb on - strand, within GFF2185 at 883.648 kb on - strand, within GFF2185 at 883.682 kb on - strand, within GFF2185 at 884.171 kb on - strand, within GFF2187 at 884.171 kb on - strand, within GFF2187 at 884.493 kb on - strand, within GFF2187 at 884.493 kb on - strand, within GFF2187 at 884.527 kb on - strand, within GFF2187 at 884.644 kb on - strand at 884.700 kb on + strand at 884.842 kb on - strand at 885.147 kb on + strand, within GFF2189 at 885.147 kb on + strand, within GFF2189 at 885.148 kb on - strand, within GFF2189 at 885.148 kb on - strand, within GFF2189 at 885.458 kb on + strand, within GFF2189 at 885.459 kb on - strand, within GFF2189 at 885.459 kb on - strand, within GFF2189 at 885.459 kb on - strand, within GFF2189 at 885.459 kb on - strand, within GFF2189 at 885.459 kb on - strand, within GFF2189 at 885.462 kb on + strand, within GFF2189 at 885.462 kb on + strand, within GFF2189 at 885.463 kb on - strand, within GFF2189 at 885.574 kb on + strand, within GFF2189 at 885.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 883,115 + GFF2184 0.74 +0.9 883,115 + GFF2184 0.74 -1.2 883,116 - GFF2184 0.74 +0.9 883,508 + GFF2185 0.34 +0.8 883,509 - GFF2185 0.34 +0.4 883,575 + GFF2185 0.54 -0.1 883,576 - GFF2185 0.54 -0.3 883,576 - GFF2185 0.54 +0.1 883,647 + GFF2185 0.75 -0.3 883,648 - GFF2185 0.75 +0.5 883,648 - GFF2185 0.75 -0.0 883,682 - GFF2185 0.85 +0.9 884,171 - GFF2187 0.24 -1.7 884,171 - GFF2187 0.24 +0.1 884,493 - GFF2187 0.69 -1.7 884,493 - GFF2187 0.69 -1.7 884,527 - GFF2187 0.74 +2.8 884,644 - +0.1 884,700 + -0.1 884,842 - -0.1 885,147 + GFF2189 0.37 -0.3 885,147 + GFF2189 0.37 +0.2 885,148 - GFF2189 0.37 -1.1 885,148 - GFF2189 0.37 -0.0 885,458 + GFF2189 0.75 +0.7 885,459 - GFF2189 0.75 -0.3 885,459 - GFF2189 0.75 +0.0 885,459 - GFF2189 0.75 -0.7 885,459 - GFF2189 0.75 +0.5 885,459 - GFF2189 0.75 -1.0 885,462 + GFF2189 0.75 -0.5 885,462 + GFF2189 0.75 -0.3 885,463 - GFF2189 0.75 +0.4 885,574 + GFF2189 0.89 +0.0 885,706 - +0.0
Or see this region's nucleotide sequence