Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2035 and GFF2036 are separated by 18 nucleotides GFF2036 and GFF2037 are separated by 41 nucleotides
GFF2035 - Gamma-glutamylputrescine oxidoreductase, at 708,297 to 709,601
GFF2035
GFF2036 - hypothetical protein, at 709,620 to 710,342
GFF2036
GFF2037 - Putative 2-aminoethylphosphonate import ATP-binding protein PhnT, at 710,384 to 711,475
GFF2037
Position (kb) 709
710
711 Strain fitness (log2 ratio) -2
-1
0
1 at 708.682 kb on + strand, within GFF2035 at 708.704 kb on + strand, within GFF2035 at 708.739 kb on + strand, within GFF2035 at 708.739 kb on + strand, within GFF2035 at 708.739 kb on + strand, within GFF2035 at 708.740 kb on - strand, within GFF2035 at 708.740 kb on - strand, within GFF2035 at 709.021 kb on + strand, within GFF2035 at 709.021 kb on + strand, within GFF2035 at 709.021 kb on + strand, within GFF2035 at 709.225 kb on + strand, within GFF2035 at 709.453 kb on + strand, within GFF2035 at 709.453 kb on + strand, within GFF2035 at 709.453 kb on + strand, within GFF2035 at 709.454 kb on - strand, within GFF2035 at 709.454 kb on - strand, within GFF2035 at 709.477 kb on + strand at 709.777 kb on + strand, within GFF2036 at 709.778 kb on - strand, within GFF2036 at 709.778 kb on - strand, within GFF2036 at 709.810 kb on + strand, within GFF2036 at 709.810 kb on + strand, within GFF2036 at 709.967 kb on - strand, within GFF2036 at 710.143 kb on + strand, within GFF2036 at 710.143 kb on + strand, within GFF2036 at 710.144 kb on - strand, within GFF2036 at 710.144 kb on - strand, within GFF2036 at 710.144 kb on - strand, within GFF2036 at 710.176 kb on + strand, within GFF2036 at 710.200 kb on + strand, within GFF2036 at 710.201 kb on - strand, within GFF2036 at 710.201 kb on - strand, within GFF2036 at 710.345 kb on + strand at 710.345 kb on + strand at 710.346 kb on - strand at 710.550 kb on + strand, within GFF2037 at 710.551 kb on - strand, within GFF2037 at 710.886 kb on + strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 710.887 kb on - strand, within GFF2037 at 711.201 kb on + strand, within GFF2037 at 711.201 kb on + strand, within GFF2037 at 711.201 kb on + strand, within GFF2037 at 711.202 kb on - strand, within GFF2037 at 711.202 kb on - strand, within GFF2037 at 711.202 kb on - strand, within GFF2037
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 708,682 + GFF2035 0.30 -0.7 708,704 + GFF2035 0.31 +1.1 708,739 + GFF2035 0.34 +0.9 708,739 + GFF2035 0.34 -0.5 708,739 + GFF2035 0.34 -1.1 708,740 - GFF2035 0.34 +0.0 708,740 - GFF2035 0.34 -1.0 709,021 + GFF2035 0.55 +0.5 709,021 + GFF2035 0.55 +0.1 709,021 + GFF2035 0.55 +0.7 709,225 + GFF2035 0.71 -0.6 709,453 + GFF2035 0.89 -0.0 709,453 + GFF2035 0.89 -0.1 709,453 + GFF2035 0.89 -0.1 709,454 - GFF2035 0.89 -0.1 709,454 - GFF2035 0.89 +0.4 709,477 + +1.4 709,777 + GFF2036 0.22 -0.2 709,778 - GFF2036 0.22 -1.1 709,778 - GFF2036 0.22 +0.7 709,810 + GFF2036 0.26 -0.3 709,810 + GFF2036 0.26 -0.3 709,967 - GFF2036 0.48 +0.6 710,143 + GFF2036 0.72 +0.7 710,143 + GFF2036 0.72 -0.2 710,144 - GFF2036 0.72 +0.9 710,144 - GFF2036 0.72 +0.6 710,144 - GFF2036 0.72 -0.5 710,176 + GFF2036 0.77 -0.1 710,200 + GFF2036 0.80 +0.3 710,201 - GFF2036 0.80 +0.5 710,201 - GFF2036 0.80 -0.3 710,345 + -1.0 710,345 + +0.2 710,346 - -1.8 710,550 + GFF2037 0.15 +0.2 710,551 - GFF2037 0.15 -1.2 710,886 + GFF2037 0.46 -1.2 710,887 - GFF2037 0.46 +0.2 710,887 - GFF2037 0.46 +0.4 710,887 - GFF2037 0.46 -0.2 710,887 - GFF2037 0.46 +0.9 711,201 + GFF2037 0.75 -1.6 711,201 + GFF2037 0.75 -0.6 711,201 + GFF2037 0.75 -0.2 711,202 - GFF2037 0.75 +0.8 711,202 - GFF2037 0.75 +1.0 711,202 - GFF2037 0.75 +0.1
Or see this region's nucleotide sequence