Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1587 and GFF1588 are separated by 213 nucleotides GFF1588 and GFF1589 are separated by 9 nucleotides
GFF1587 - Long-chain-fatty-acid--CoA ligase, at 233,048 to 234,646
GFF1587
GFF1588 - 2-haloacrylate reductase, at 234,860 to 235,846
GFF1588
GFF1589 - Putative acyl-CoA dehydrogenase FadE17, at 235,856 to 237,034
GFF1589
Position (kb) 234
235
236 Strain fitness (log2 ratio) -1
0
1 at 233.973 kb on + strand, within GFF1587 at 234.316 kb on - strand, within GFF1587 at 234.397 kb on + strand, within GFF1587 at 234.489 kb on + strand at 234.489 kb on + strand at 234.490 kb on - strand at 234.694 kb on + strand at 234.865 kb on + strand at 234.866 kb on - strand at 234.866 kb on - strand at 234.866 kb on - strand at 234.866 kb on - strand at 235.004 kb on + strand, within GFF1588 at 235.004 kb on + strand, within GFF1588 at 235.004 kb on + strand, within GFF1588 at 235.004 kb on + strand, within GFF1588 at 235.004 kb on + strand, within GFF1588 at 235.005 kb on - strand, within GFF1588 at 235.005 kb on - strand, within GFF1588 at 235.127 kb on + strand, within GFF1588 at 235.128 kb on - strand, within GFF1588 at 235.128 kb on - strand, within GFF1588 at 235.128 kb on - strand, within GFF1588 at 235.151 kb on + strand, within GFF1588 at 235.151 kb on + strand, within GFF1588 at 235.152 kb on - strand, within GFF1588 at 235.442 kb on + strand, within GFF1588 at 235.442 kb on + strand, within GFF1588 at 235.508 kb on + strand, within GFF1588 at 235.508 kb on + strand, within GFF1588 at 235.508 kb on + strand, within GFF1588 at 235.508 kb on + strand, within GFF1588 at 235.508 kb on + strand, within GFF1588 at 235.508 kb on + strand, within GFF1588 at 235.509 kb on - strand, within GFF1588 at 235.509 kb on - strand, within GFF1588 at 236.045 kb on + strand, within GFF1589 at 236.046 kb on - strand, within GFF1589 at 236.046 kb on - strand, within GFF1589 at 236.046 kb on - strand, within GFF1589 at 236.046 kb on - strand, within GFF1589 at 236.138 kb on + strand, within GFF1589 at 236.138 kb on + strand, within GFF1589 at 236.139 kb on - strand, within GFF1589 at 236.160 kb on - strand, within GFF1589 at 236.160 kb on - strand, within GFF1589 at 236.192 kb on + strand, within GFF1589 at 236.193 kb on - strand, within GFF1589 at 236.193 kb on - strand, within GFF1589 at 236.308 kb on + strand, within GFF1589 at 236.308 kb on + strand, within GFF1589 at 236.308 kb on + strand, within GFF1589 at 236.308 kb on + strand, within GFF1589 at 236.308 kb on + strand, within GFF1589 at 236.308 kb on + strand, within GFF1589 at 236.309 kb on - strand, within GFF1589 at 236.309 kb on - strand, within GFF1589 at 236.310 kb on - strand, within GFF1589 at 236.357 kb on + strand, within GFF1589 at 236.357 kb on + strand, within GFF1589 at 236.357 kb on + strand, within GFF1589 at 236.358 kb on - strand, within GFF1589 at 236.686 kb on - strand, within GFF1589
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 233,973 + GFF1587 0.58 -0.6 234,316 - GFF1587 0.79 -0.1 234,397 + GFF1587 0.84 -0.6 234,489 + +0.2 234,489 + -0.0 234,490 - -0.2 234,694 + +0.3 234,865 + -1.1 234,866 - +0.9 234,866 - -0.1 234,866 - +0.2 234,866 - +0.1 235,004 + GFF1588 0.15 -1.4 235,004 + GFF1588 0.15 -0.5 235,004 + GFF1588 0.15 -0.7 235,004 + GFF1588 0.15 -0.4 235,004 + GFF1588 0.15 -0.3 235,005 - GFF1588 0.15 -1.3 235,005 - GFF1588 0.15 +0.2 235,127 + GFF1588 0.27 +0.8 235,128 - GFF1588 0.27 +0.5 235,128 - GFF1588 0.27 -0.9 235,128 - GFF1588 0.27 +0.7 235,151 + GFF1588 0.29 -1.2 235,151 + GFF1588 0.29 -0.3 235,152 - GFF1588 0.30 +0.2 235,442 + GFF1588 0.59 -1.1 235,442 + GFF1588 0.59 +0.8 235,508 + GFF1588 0.66 -1.7 235,508 + GFF1588 0.66 +0.3 235,508 + GFF1588 0.66 -0.6 235,508 + GFF1588 0.66 +0.4 235,508 + GFF1588 0.66 -0.2 235,508 + GFF1588 0.66 +0.0 235,509 - GFF1588 0.66 +0.2 235,509 - GFF1588 0.66 +0.6 236,045 + GFF1589 0.16 +0.1 236,046 - GFF1589 0.16 +0.1 236,046 - GFF1589 0.16 -0.8 236,046 - GFF1589 0.16 -0.9 236,046 - GFF1589 0.16 -1.3 236,138 + GFF1589 0.24 +0.4 236,138 + GFF1589 0.24 +0.1 236,139 - GFF1589 0.24 +0.6 236,160 - GFF1589 0.26 -0.4 236,160 - GFF1589 0.26 +0.8 236,192 + GFF1589 0.28 +1.3 236,193 - GFF1589 0.29 -0.2 236,193 - GFF1589 0.29 +0.2 236,308 + GFF1589 0.38 +0.4 236,308 + GFF1589 0.38 +1.2 236,308 + GFF1589 0.38 +0.3 236,308 + GFF1589 0.38 -0.4 236,308 + GFF1589 0.38 -0.1 236,308 + GFF1589 0.38 +1.2 236,309 - GFF1589 0.38 +1.2 236,309 - GFF1589 0.38 -0.6 236,310 - GFF1589 0.39 +0.0 236,357 + GFF1589 0.42 +0.5 236,357 + GFF1589 0.42 -0.3 236,357 + GFF1589 0.42 -0.1 236,358 - GFF1589 0.43 -1.7 236,686 - GFF1589 0.70 +0.2
Or see this region's nucleotide sequence