Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1462 and GFF1463 are separated by 21 nucleotides GFF1463 and GFF1464 are separated by 4 nucleotides GFF1464 and GFF1465 are separated by 97 nucleotides
GFF1462 - hypothetical protein, at 101,258 to 102,403
GFF1462
GFF1463 - Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain, at 102,425 to 103,696
GFF1463
GFF1464 - hypothetical protein, at 103,701 to 104,219
GFF1464
GFF1465 - Cytochrome c2, at 104,317 to 104,712
GFF1465
Position (kb) 102
103
104 Strain fitness (log2 ratio) -2
-1
0
1
2 at 101.483 kb on + strand, within GFF1462 at 101.484 kb on - strand, within GFF1462 at 101.597 kb on + strand, within GFF1462 at 101.597 kb on + strand, within GFF1462 at 101.598 kb on - strand, within GFF1462 at 101.598 kb on - strand, within GFF1462 at 101.598 kb on - strand, within GFF1462 at 101.598 kb on - strand, within GFF1462 at 101.598 kb on - strand, within GFF1462 at 101.654 kb on + strand, within GFF1462 at 101.654 kb on + strand, within GFF1462 at 101.655 kb on - strand, within GFF1462 at 101.655 kb on - strand, within GFF1462 at 101.655 kb on - strand, within GFF1462 at 101.732 kb on + strand, within GFF1462 at 101.733 kb on - strand, within GFF1462 at 101.925 kb on - strand, within GFF1462 at 102.116 kb on + strand, within GFF1462 at 102.117 kb on - strand, within GFF1462 at 102.389 kb on + strand at 102.389 kb on + strand at 102.390 kb on - strand at 102.390 kb on - strand at 102.395 kb on + strand at 102.401 kb on + strand at 102.457 kb on - strand at 102.621 kb on + strand, within GFF1463 at 102.621 kb on + strand, within GFF1463 at 102.621 kb on + strand, within GFF1463 at 102.621 kb on + strand, within GFF1463 at 102.622 kb on - strand, within GFF1463 at 102.888 kb on + strand, within GFF1463 at 102.985 kb on - strand, within GFF1463 at 103.055 kb on - strand, within GFF1463 at 103.055 kb on - strand, within GFF1463 at 103.055 kb on - strand, within GFF1463 at 103.113 kb on + strand, within GFF1463 at 103.281 kb on + strand, within GFF1463 at 103.320 kb on + strand, within GFF1463 at 103.320 kb on + strand, within GFF1463 at 103.320 kb on + strand, within GFF1463 at 103.321 kb on - strand, within GFF1463 at 103.494 kb on + strand, within GFF1463 at 103.494 kb on + strand, within GFF1463 at 103.495 kb on - strand, within GFF1463 at 103.661 kb on + strand at 103.661 kb on + strand at 103.832 kb on - strand, within GFF1464 at 103.832 kb on - strand, within GFF1464 at 103.832 kb on - strand, within GFF1464 at 103.843 kb on + strand, within GFF1464 at 103.844 kb on - strand, within GFF1464 at 103.844 kb on - strand, within GFF1464 at 103.844 kb on - strand, within GFF1464 at 104.014 kb on + strand, within GFF1464 at 104.014 kb on + strand, within GFF1464 at 104.065 kb on + strand, within GFF1464 at 104.065 kb on + strand, within GFF1464 at 104.121 kb on + strand, within GFF1464 at 104.121 kb on + strand, within GFF1464 at 104.318 kb on + strand at 104.319 kb on - strand at 104.319 kb on - strand at 104.391 kb on + strand, within GFF1465 at 104.445 kb on - strand, within GFF1465 at 104.516 kb on + strand, within GFF1465
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 101,483 + GFF1462 0.20 +0.1 101,484 - GFF1462 0.20 +0.0 101,597 + GFF1462 0.30 +0.8 101,597 + GFF1462 0.30 +1.1 101,598 - GFF1462 0.30 +0.3 101,598 - GFF1462 0.30 -1.1 101,598 - GFF1462 0.30 -0.0 101,598 - GFF1462 0.30 -1.3 101,598 - GFF1462 0.30 -2.0 101,654 + GFF1462 0.35 +0.9 101,654 + GFF1462 0.35 -1.6 101,655 - GFF1462 0.35 +0.0 101,655 - GFF1462 0.35 -0.8 101,655 - GFF1462 0.35 +0.2 101,732 + GFF1462 0.41 +0.2 101,733 - GFF1462 0.41 -1.6 101,925 - GFF1462 0.58 +0.2 102,116 + GFF1462 0.75 +0.6 102,117 - GFF1462 0.75 -1.7 102,389 + -0.2 102,389 + +1.4 102,390 - -0.5 102,390 - -0.1 102,395 + -0.2 102,401 + -0.2 102,457 - +0.3 102,621 + GFF1463 0.15 +0.5 102,621 + GFF1463 0.15 +0.6 102,621 + GFF1463 0.15 +0.4 102,621 + GFF1463 0.15 +0.1 102,622 - GFF1463 0.15 -0.7 102,888 + GFF1463 0.36 -0.1 102,985 - GFF1463 0.44 +0.2 103,055 - GFF1463 0.50 -1.6 103,055 - GFF1463 0.50 -2.3 103,055 - GFF1463 0.50 -0.9 103,113 + GFF1463 0.54 -0.3 103,281 + GFF1463 0.67 +0.4 103,320 + GFF1463 0.70 +1.9 103,320 + GFF1463 0.70 +0.3 103,320 + GFF1463 0.70 -1.1 103,321 - GFF1463 0.70 -0.2 103,494 + GFF1463 0.84 +0.2 103,494 + GFF1463 0.84 -1.2 103,495 - GFF1463 0.84 -0.4 103,661 + +0.1 103,661 + -0.9 103,832 - GFF1464 0.25 -0.3 103,832 - GFF1464 0.25 -0.8 103,832 - GFF1464 0.25 +0.5 103,843 + GFF1464 0.27 +0.0 103,844 - GFF1464 0.28 -1.5 103,844 - GFF1464 0.28 -0.8 103,844 - GFF1464 0.28 -1.6 104,014 + GFF1464 0.60 -0.8 104,014 + GFF1464 0.60 +0.8 104,065 + GFF1464 0.70 -0.8 104,065 + GFF1464 0.70 -0.8 104,121 + GFF1464 0.81 +0.0 104,121 + GFF1464 0.81 -0.7 104,318 + -0.5 104,319 - -0.0 104,319 - -0.9 104,391 + GFF1465 0.19 +0.3 104,445 - GFF1465 0.32 -0.4 104,516 + GFF1465 0.50 +0.3
Or see this region's nucleotide sequence