Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1456 and GFF1457 overlap by 4 nucleotides GFF1457 and GFF1458 overlap by 4 nucleotides
GFF1456 - Glycogen operon protein GlgX, at 90,648 to 92,750
GFF1456
GFF1457 - Malto-oligosyltrehalose trehalohydrolase, at 92,747 to 94,498
GFF1457
GFF1458 - 4-alpha-glucanotransferase, at 94,495 to 96,528
GFF1458
Position (kb) 92
93
94
95 Strain fitness (log2 ratio) -1
0
1 at 91.998 kb on + strand, within GFF1456 at 91.998 kb on + strand, within GFF1456 at 91.998 kb on + strand, within GFF1456 at 92.104 kb on - strand, within GFF1456 at 92.271 kb on + strand, within GFF1456 at 92.968 kb on + strand, within GFF1457 at 92.969 kb on - strand, within GFF1457 at 92.969 kb on - strand, within GFF1457 at 93.099 kb on + strand, within GFF1457 at 93.124 kb on + strand, within GFF1457 at 93.170 kb on - strand, within GFF1457 at 93.225 kb on - strand, within GFF1457 at 93.225 kb on - strand, within GFF1457 at 93.260 kb on + strand, within GFF1457 at 93.260 kb on + strand, within GFF1457 at 93.261 kb on - strand, within GFF1457 at 93.261 kb on - strand, within GFF1457 at 93.261 kb on - strand, within GFF1457 at 93.339 kb on - strand, within GFF1457 at 93.339 kb on - strand, within GFF1457 at 93.339 kb on - strand, within GFF1457 at 93.365 kb on + strand, within GFF1457 at 93.366 kb on - strand, within GFF1457 at 93.378 kb on - strand, within GFF1457 at 93.725 kb on + strand, within GFF1457 at 93.725 kb on + strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.728 kb on + strand, within GFF1457 at 93.728 kb on + strand, within GFF1457 at 93.728 kb on + strand, within GFF1457 at 94.976 kb on - strand, within GFF1458 at 95.299 kb on + strand, within GFF1458 at 95.300 kb on - strand, within GFF1458 at 95.300 kb on - strand, within GFF1458
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 91,998 + GFF1456 0.64 -0.4 91,998 + GFF1456 0.64 +0.1 91,998 + GFF1456 0.64 -0.6 92,104 - GFF1456 0.69 -0.4 92,271 + GFF1456 0.77 -1.1 92,968 + GFF1457 0.13 +0.9 92,969 - GFF1457 0.13 -0.7 92,969 - GFF1457 0.13 +0.2 93,099 + GFF1457 0.20 +0.8 93,124 + GFF1457 0.22 -0.9 93,170 - GFF1457 0.24 -0.9 93,225 - GFF1457 0.27 +1.2 93,225 - GFF1457 0.27 -0.2 93,260 + GFF1457 0.29 +1.7 93,260 + GFF1457 0.29 -1.1 93,261 - GFF1457 0.29 -0.2 93,261 - GFF1457 0.29 +0.2 93,261 - GFF1457 0.29 -0.1 93,339 - GFF1457 0.34 +0.6 93,339 - GFF1457 0.34 +0.5 93,339 - GFF1457 0.34 -0.3 93,365 + GFF1457 0.35 +1.0 93,366 - GFF1457 0.35 -0.0 93,378 - GFF1457 0.36 -0.4 93,725 + GFF1457 0.56 +0.8 93,725 + GFF1457 0.56 +0.4 93,726 - GFF1457 0.56 +0.0 93,726 - GFF1457 0.56 -0.4 93,726 - GFF1457 0.56 +0.3 93,726 - GFF1457 0.56 +0.6 93,728 + GFF1457 0.56 +0.3 93,728 + GFF1457 0.56 +0.9 93,728 + GFF1457 0.56 +0.1 94,976 - GFF1458 0.24 -0.0 95,299 + GFF1458 0.40 +0.9 95,300 - GFF1458 0.40 +0.3 95,300 - GFF1458 0.40 -1.3
Or see this region's nucleotide sequence