Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS16345

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
3,628,103	+				+0.3
3,628,103	+				+0.6
3,628,104	-				-0.5
3,628,104	-				+0.6
3,628,104	-				+2.2
3,628,169	+				-2.0
3,628,170	-				-0.1
3,628,170	-				+0.8
3,628,170	-				-0.0
3,628,179	+				-0.1
3,628,179	+				+1.3
3,628,179	+				+0.4
3,628,179	+				+1.3
3,628,179	+				-1.4
3,628,180	-				+0.4
3,628,180	-				+0.2
3,628,198	+				+1.6
3,628,198	+				+0.8
3,628,198	+				+0.5
3,628,198	+				-0.7
3,628,199	-				+0.5
3,628,199	-				-1.2
3,628,199	-				-0.3
3,628,199	-				-0.6
3,628,199	-				-0.9
3,628,199	-				-0.5
3,628,199	-				-0.3
3,628,211	+				-1.6
3,628,211	+				-0.0
3,628,212	-				-0.1
3,628,212	-				-0.5
3,628,212	-				-0.2
3,628,212	-				+0.2
3,628,213	+				+0.0
3,628,213	+				+0.2
3,628,213	+				+2.0
3,628,213	+				-0.6
3,628,213	+				+0.1
3,628,213	+				-0.4
3,628,213	+				+1.0
3,628,213	+				-0.9
3,628,213	+				-0.2
3,628,213	+				-0.4
3,628,213	+				-1.0
3,628,214	-				-0.6
3,628,214	-				+1.4
3,628,214	-				+1.1
3,628,214	-				-1.4
3,628,214	-				+0.6
3,628,246	+				-0.4
3,628,246	+				-0.6
3,628,246	+				-1.1
3,628,246	+				-0.2
3,628,246	+				-0.3
3,628,246	+				-0.5
3,628,246	+				+0.7
3,628,246	+				+0.2
3,628,247	-				-0.7
3,628,247	-				-0.2
3,628,247	-				-0.8
3,628,247	-				-0.2
3,628,247	-				-0.4
3,628,247	-				+1.1
3,628,260	+				-0.5
3,628,273	+				-0.2
3,628,273	+				+1.0
3,628,397	+		QEN71_RS16340	0.20	+0.2
3,628,398	-		QEN71_RS16340	0.20	-1.3
3,628,398	-		QEN71_RS16340	0.20	-1.1
3,628,398	-		QEN71_RS16340	0.20	+1.0
3,628,562	+		QEN71_RS16340	0.42	-0.6
3,628,562	+		QEN71_RS16340	0.42	-0.6
3,628,591	+		QEN71_RS16340	0.45	+0.1
3,628,591	+		QEN71_RS16340	0.45	+0.4
3,628,591	+		QEN71_RS16340	0.45	-0.3
3,628,592	-		QEN71_RS16340	0.45	-0.0
3,628,592	-		QEN71_RS16340	0.45	+0.7
3,628,592	-		QEN71_RS16340	0.45	-1.0
3,628,592	-		QEN71_RS16340	0.45	-1.0
3,628,592	-		QEN71_RS16340	0.45	+0.1
3,628,592	-		QEN71_RS16340	0.45	+0.3
3,628,733	+		QEN71_RS16340	0.64	-0.5
3,628,733	+		QEN71_RS16340	0.64	-0.2
3,628,733	+		QEN71_RS16340	0.64	-0.2
3,628,733	+		QEN71_RS16340	0.64	-0.2
3,628,745	+		QEN71_RS16340	0.66	+0.8
3,628,745	+		QEN71_RS16340	0.66	-0.9
3,628,745	+		QEN71_RS16340	0.66	+0.6
3,628,745	+		QEN71_RS16340	0.66	-0.4
3,628,745	+		QEN71_RS16340	0.66	-0.2
3,628,745	+		QEN71_RS16340	0.66	-2.3
3,628,745	+		QEN71_RS16340	0.66	+0.8
3,628,745	+		QEN71_RS16340	0.66	-0.1
3,628,745	+		QEN71_RS16340	0.66	-0.2
3,628,745	+		QEN71_RS16340	0.66	+0.6
3,628,745	+		QEN71_RS16340	0.66	-1.6
3,628,745	+		QEN71_RS16340	0.66	+2.9
3,628,746	-		QEN71_RS16340	0.66	-0.0
3,628,746	-		QEN71_RS16340	0.66	-0.7
3,628,746	-		QEN71_RS16340	0.66	-0.4
3,628,746	-		QEN71_RS16340	0.66	+0.4
3,628,746	-		QEN71_RS16340	0.66	+0.4
3,628,746	-		QEN71_RS16340	0.66	-0.5
3,628,746	-		QEN71_RS16340	0.66	-0.1
3,628,746	-		QEN71_RS16340	0.66	+0.2
3,628,746	-		QEN71_RS16340	0.66	+0.4
3,628,746	-		QEN71_RS16340	0.66	-0.3
3,628,746	-		QEN71_RS16340	0.66	-1.0
3,628,838	+		QEN71_RS16340	0.78	+0.0
3,628,898	+		QEN71_RS16340	0.86	+0.5
3,628,898	+		QEN71_RS16340	0.86	+0.1
3,628,899	-		QEN71_RS16340	0.86	+0.6
3,628,899	-		QEN71_RS16340	0.86	+0.8
3,628,899	-		QEN71_RS16340	0.86	-1.6
3,628,899	-		QEN71_RS16340	0.86	+0.3
3,629,003	+				-1.1
3,629,003	+				-1.6
3,629,004	-				-0.5
3,629,010	+				-1.8
3,629,010	+				-1.9
3,629,011	-				-0.6
3,629,011	-				-0.8
3,629,011	-				-0.6
3,629,011	-				-0.5
3,629,253	+				-1.4
3,629,253	+				-0.7
3,629,253	+				+0.2
3,629,319	+				-2.3
3,629,461	-		QEN71_RS16350	0.29	+0.5
3,629,648	-		QEN71_RS16350	0.55	-0.3
3,629,648	-		QEN71_RS16350	0.55	-0.0
3,629,661	+		QEN71_RS16350	0.57	-0.3
3,629,661	+		QEN71_RS16350	0.57	+0.5
3,629,661	+		QEN71_RS16350	0.57	-0.7
3,629,662	-		QEN71_RS16350	0.57	-0.5
3,629,662	-		QEN71_RS16350	0.57	+0.8
3,629,662	-		QEN71_RS16350	0.57	+0.2
3,629,662	-		QEN71_RS16350	0.57	+1.9
3,629,799	+		QEN71_RS16350	0.76	+0.2
3,629,799	+		QEN71_RS16350	0.76	-0.2
3,629,799	+		QEN71_RS16350	0.76	+0.3
3,629,799	+		QEN71_RS16350	0.76	+0.7
3,629,799	+		QEN71_RS16350	0.76	-1.7
3,629,799	+		QEN71_RS16350	0.76	+0.2
3,629,799	+		QEN71_RS16350	0.76	+0.7
3,629,799	+		QEN71_RS16350	0.76	-0.2
3,629,799	+		QEN71_RS16350	0.76	-0.0
3,629,799	+		QEN71_RS16350	0.76	+1.4
3,629,799	+		QEN71_RS16350	0.76	+0.5
3,629,799	+		QEN71_RS16350	0.76	-0.2
3,629,799	+		QEN71_RS16350	0.76	-1.2
3,629,799	+		QEN71_RS16350	0.76	-0.4
3,629,799	+		QEN71_RS16350	0.76	-0.8
3,629,800	-		QEN71_RS16350	0.76	+0.4
3,629,800	-		QEN71_RS16350	0.76	+0.8
3,629,800	-		QEN71_RS16350	0.76	-0.1
3,629,800	-		QEN71_RS16350	0.76	+0.3
3,629,800	-		QEN71_RS16350	0.76	+0.9
3,629,956	+				-0.5
3,630,030	+				-0.1
3,630,030	+				-0.9
3,630,030	+				-1.0
3,630,031	-				-3.9
3,630,031	-				+0.2
3,630,091	-				-0.0
3,630,091	-				+0.5
3,630,091	-				+0.1
3,630,099	+				+0.6
3,630,099	+				+0.7
3,630,099	+				-0.2
3,630,099	+				-0.3
3,630,100	-				-0.4
3,630,100	-				+0.5
3,630,100	-				-0.3
3,630,100	-				+0.9
3,630,100	-				+0.4
3,630,100	-				+1.4
3,630,255	+		QEN71_RS16355	0.36	-0.5
3,630,255	+		QEN71_RS16355	0.36	-0.1
3,630,255	+		QEN71_RS16355	0.36	+0.1
3,630,255	+		QEN71_RS16355	0.36	-0.8
3,630,255	+		QEN71_RS16355	0.36	-0.6
3,630,255	+		QEN71_RS16355	0.36	+0.7
3,630,255	+		QEN71_RS16355	0.36	-0.0