Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS08810

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
1,978,949	-		QEN71_RS08805	0.64	-0.3
1,978,949	-		QEN71_RS08805	0.64	-0.3
1,979,081	-		QEN71_RS08805	0.69	-0.8
1,979,081	-		QEN71_RS08805	0.69	-1.4
1,979,143	+		QEN71_RS08805	0.72	+1.8
1,979,143	+		QEN71_RS08805	0.72	+0.6
1,979,143	+		QEN71_RS08805	0.72	+1.0
1,979,144	-		QEN71_RS08805	0.72	+0.0
1,979,144	-		QEN71_RS08805	0.72	+0.3
1,979,144	-		QEN71_RS08805	0.72	-1.7
1,979,464	-		QEN71_RS08805	0.86	+0.4
1,979,503	+		QEN71_RS08805	0.87	-1.0
1,979,504	-		QEN71_RS08805	0.87	+0.1
1,979,518	+		QEN71_RS08805	0.88	+0.2
1,979,518	+		QEN71_RS08805	0.88	+0.8
1,979,518	+		QEN71_RS08805	0.88	+0.7
1,979,519	-		QEN71_RS08805	0.88	-0.6
1,979,541	+		QEN71_RS08805	0.89	-0.5
1,979,541	+		QEN71_RS08805	0.89	+0.5
1,979,541	+		QEN71_RS08805	0.89	-0.1
1,979,722	+				-1.7
1,979,722	+				-0.5
1,979,810	+				-1.4
1,979,810	+				+1.8
1,979,811	-				+0.9
1,979,811	-				-0.4
1,979,811	-				-0.2
1,979,829	+				+1.3
1,979,830	-				-0.5
1,979,979	+				+0.3
1,979,980	-				-0.8
1,980,017	+		QEN71_RS08810	0.13	+1.1
1,980,017	+		QEN71_RS08810	0.13	+0.1
1,980,017	+		QEN71_RS08810	0.13	-0.2
1,980,018	-		QEN71_RS08810	0.13	-0.2
1,980,020	+		QEN71_RS08810	0.13	-0.6
1,980,021	-		QEN71_RS08810	0.13	-1.5
1,980,021	-		QEN71_RS08810	0.13	+0.9
1,980,021	-		QEN71_RS08810	0.13	+0.6
1,980,167	+		QEN71_RS08810	0.29	+0.4
1,980,167	+		QEN71_RS08810	0.29	+0.1
1,980,167	+		QEN71_RS08810	0.29	-0.4
1,980,167	+		QEN71_RS08810	0.29	+0.4
1,980,168	-		QEN71_RS08810	0.29	-0.2
1,980,168	-		QEN71_RS08810	0.29	-1.2
1,980,194	+		QEN71_RS08810	0.32	-0.6
1,980,195	-		QEN71_RS08810	0.32	+0.2
1,980,195	-		QEN71_RS08810	0.32	+1.0
1,980,195	-		QEN71_RS08810	0.32	+0.8
1,980,204	-		QEN71_RS08810	0.33	-0.4
1,980,232	-		QEN71_RS08810	0.36	+0.5
1,980,232	-		QEN71_RS08810	0.36	-0.7
1,980,232	-		QEN71_RS08810	0.36	+0.5
1,980,270	-		QEN71_RS08810	0.40	-0.2
1,980,270	-		QEN71_RS08810	0.40	-0.1
1,980,318	-		QEN71_RS08810	0.45	-0.3
1,980,338	+		QEN71_RS08810	0.47	-1.0
1,980,380	+		QEN71_RS08810	0.51	-0.6
1,980,380	+		QEN71_RS08810	0.51	+0.2
1,980,381	-		QEN71_RS08810	0.52	-0.2
1,980,605	+		QEN71_RS08810	0.75	+0.4
1,980,605	+		QEN71_RS08810	0.75	+0.0
1,980,605	+		QEN71_RS08810	0.75	+0.4
1,980,605	+		QEN71_RS08810	0.75	-1.3
1,980,605	+		QEN71_RS08810	0.75	-0.2
1,980,605	+		QEN71_RS08810	0.75	-0.7
1,980,606	-		QEN71_RS08810	0.76	-1.5
1,980,606	-		QEN71_RS08810	0.76	-2.0
1,980,606	-		QEN71_RS08810	0.76	-0.6
1,980,606	-		QEN71_RS08810	0.76	-0.7
1,980,606	-		QEN71_RS08810	0.76	-0.5
1,980,606	-		QEN71_RS08810	0.76	-0.2
1,980,606	-		QEN71_RS08810	0.76	-0.2
1,980,606	-		QEN71_RS08810	0.76	+0.8
1,980,606	-		QEN71_RS08810	0.76	-0.4
1,980,618	-		QEN71_RS08810	0.77	+1.3
1,980,707	+		QEN71_RS08810	0.86	-0.3
1,980,707	+		QEN71_RS08810	0.86	+0.6
1,980,707	+		QEN71_RS08810	0.86	+0.3
1,980,708	-		QEN71_RS08810	0.86	+1.0
1,980,708	-		QEN71_RS08810	0.86	+0.1
1,980,708	-		QEN71_RS08810	0.86	+0.8
1,980,750	-				+0.5
1,980,782	+				+1.6
1,980,821	+				-0.3
1,980,821	+				-0.8
1,980,821	+				+0.3
1,980,822	-				+0.7
1,980,822	-				+0.7
1,980,822	-				-1.2
1,980,876	+				-2.2
1,980,877	-				-0.4
1,980,877	-				+0.1
1,980,877	-				+0.6
1,980,943	+		QEN71_RS08815	0.13	-1.0
1,980,943	+		QEN71_RS08815	0.13	-1.6
1,980,943	+		QEN71_RS08815	0.13	-0.4
1,980,944	-		QEN71_RS08815	0.13	+0.2
1,980,944	-		QEN71_RS08815	0.13	+1.4
1,980,944	-		QEN71_RS08815	0.13	-0.2
1,980,944	-		QEN71_RS08815	0.13	+0.1
1,980,982	+		QEN71_RS08815	0.19	-0.0
1,980,983	-		QEN71_RS08815	0.20	+0.3
1,981,037	+		QEN71_RS08815	0.28	-0.9
1,981,037	+		QEN71_RS08815	0.28	-1.0
1,981,037	+		QEN71_RS08815	0.28	+0.8
1,981,037	+		QEN71_RS08815	0.28	+0.3
1,981,037	+		QEN71_RS08815	0.28	+0.2
1,981,038	-		QEN71_RS08815	0.28	+0.1
1,981,038	-		QEN71_RS08815	0.28	+0.3
1,981,038	-		QEN71_RS08815	0.28	+0.7
1,981,074	+		QEN71_RS08815	0.34	-0.8
1,981,074	+		QEN71_RS08815	0.34	-0.9
1,981,074	+		QEN71_RS08815	0.34	-0.3
1,981,075	-		QEN71_RS08815	0.34	+0.8
1,981,075	-		QEN71_RS08815	0.34	+0.8
1,981,122	+		QEN71_RS08815	0.41	+1.4
1,981,122	+		QEN71_RS08815	0.41	-0.6
1,981,123	-		QEN71_RS08815	0.41	-0.4
1,981,123	-		QEN71_RS08815	0.41	-0.4
1,981,138	+		QEN71_RS08815	0.44	+1.5
1,981,138	+		QEN71_RS08815	0.44	-1.0
1,981,138	+		QEN71_RS08815	0.44	+0.9
1,981,138	+		QEN71_RS08815	0.44	-0.6
1,981,138	+		QEN71_RS08815	0.44	-0.1
1,981,138	+		QEN71_RS08815	0.44	-0.1
1,981,139	-		QEN71_RS08815	0.44	-0.6
1,981,139	-		QEN71_RS08815	0.44	-1.3
1,981,139	-		QEN71_RS08815	0.44	-1.4
1,981,139	-		QEN71_RS08815	0.44	+1.2
1,981,139	-		QEN71_RS08815	0.44	-0.8
1,981,143	-		QEN71_RS08815	0.45	+0.8
1,981,228	+		QEN71_RS08815	0.58	-0.6
1,981,228	+		QEN71_RS08815	0.58	+0.0
1,981,228	+		QEN71_RS08815	0.58	-0.7
1,981,229	-		QEN71_RS08815	0.58	-2.4
1,981,237	+		QEN71_RS08815	0.59	+1.0
1,981,237	+		QEN71_RS08815	0.59	-0.8
1,981,237	+		QEN71_RS08815	0.59	-0.9
1,981,237	+		QEN71_RS08815	0.59	-0.8
1,981,237	+		QEN71_RS08815	0.59	-0.4
1,981,238	-		QEN71_RS08815	0.59	-0.8
1,981,238	-		QEN71_RS08815	0.59	+2.5
1,981,238	-		QEN71_RS08815	0.59	+1.2
1,981,238	-		QEN71_RS08815	0.59	+0.3
1,981,238	-		QEN71_RS08815	0.59	+0.2
1,981,238	-		QEN71_RS08815	0.59	+0.3
1,981,238	-		QEN71_RS08815	0.59	-0.5
1,981,444	+				-1.2
1,981,453	+				-0.8
1,981,453	+				-1.2
1,981,561	+				-0.9
1,981,562	-				-0.2
1,981,595	+				-0.2
1,981,595	+				+0.4
1,981,595	+				+0.9
1,981,595	+				-1.1
1,981,595	+				+0.2
1,981,595	+				+0.4
1,981,596	-				-1.0
1,981,621	+				-0.4
1,981,622	-				-1.1
1,981,622	-				+0.5
1,981,682	+				+0.2
1,981,683	-				+0.8