Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04020

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
4,508,185	+				-0.9
4,508,185	+				-0.8
4,508,185	+				-0.4
4,508,185	+				-1.0
4,508,185	+				-0.3
4,508,185	+				+0.9
4,508,185	+				-0.9
4,508,185	+				-1.0
4,508,185	+				+0.3
4,508,185	+				+0.4
4,508,185	+				-0.7
4,508,185	+				+1.2
4,508,185	+				-1.2
4,508,185	+				+0.0
4,508,185	+				-2.8
4,508,185	+				-0.6
4,508,207	+				-1.6
4,508,230	-				-1.9
4,508,230	-				-0.9
4,508,243	+				+1.2
4,508,243	+				-0.6
4,508,256	-				-3.1
4,508,321	-				-0.5
4,508,398	+				+0.1
4,508,411	-				-0.3
4,508,411	-				-1.0
4,508,605	+				-0.1
4,508,607	+				-0.2
4,508,625	-				+1.0
4,508,658	+				-2.0
4,508,669	+				+0.3
4,508,669	+				-0.4
4,508,677	-				-2.2
4,508,677	-				-3.4
4,508,695	-				-2.0
4,508,714	+				+0.5
4,508,739	-				+1.9
4,508,799	-		MIT1002_04020	0.12	+0.0
4,508,822	+		MIT1002_04020	0.15	+1.6
4,508,835	-		MIT1002_04020	0.17	-1.6
4,508,879	+		MIT1002_04020	0.23	-0.4
4,508,887	-		MIT1002_04020	0.24	+1.1
4,508,887	-		MIT1002_04020	0.24	+0.7
4,509,042	+		MIT1002_04020	0.46	+0.4
4,509,050	-		MIT1002_04020	0.48	+0.6
4,509,097	-		MIT1002_04020	0.54	+0.2
4,509,135	-		MIT1002_04020	0.60	+1.4
4,509,192	+		MIT1002_04020	0.68	-0.4
4,509,291	+		MIT1002_04020	0.82	+0.6
4,509,291	+		MIT1002_04020	0.82	-1.0
4,509,303	+		MIT1002_04020	0.83	+1.2
4,509,303	+		MIT1002_04020	0.83	+0.9
4,509,311	-		MIT1002_04020	0.85	-0.6
4,509,321	-		MIT1002_04020	0.86	+0.7
4,509,370	+				-0.2
4,509,393	-				-0.1
4,509,539	+				+2.0
4,509,546	-		MIT1002_04021	0.10	-0.5
4,509,546	-		MIT1002_04021	0.10	+0.5
4,509,677	+		MIT1002_04021	0.44	+0.3
4,509,689	+		MIT1002_04021	0.47	+0.3
4,509,693	+		MIT1002_04021	0.48	+0.0
4,509,734	-		MIT1002_04021	0.59	-1.0
4,509,860	+				+0.0
4,509,865	+				+0.1
4,509,868	-				+1.0
4,509,905	+				+0.0
4,509,913	-				-0.9
4,509,947	-				-0.8
4,509,966	-				-0.3
4,510,041	+				-1.6
4,510,043	-				+2.4
4,510,092	+				+0.1
4,510,102	+				+1.8
4,510,110	-				-0.3
4,510,186	+				-1.4
4,510,196	+				-3.7
4,510,204	-				+1.5
4,510,204	-				+0.7
4,510,206	+				-2.0
4,510,206	+				+1.0
4,510,206	+				+2.8
4,510,206	+				+0.3
4,510,206	+				-2.9
4,510,206	+				-1.3
4,510,206	+				-1.6
4,510,207	-				-2.0
4,510,214	-				+0.3
4,510,214	-				-0.4
4,510,214	-				+0.1
4,510,214	-				+1.2
4,510,214	-				-0.4
4,510,214	-				+1.4
4,510,214	-				+1.4
4,510,214	-				+0.5
4,510,296	+		MIT1002_04022	0.18	+1.7
4,510,298	+		MIT1002_04022	0.19	-0.4
4,510,306	+		MIT1002_04022	0.20	-0.1
4,510,308	+		MIT1002_04022	0.20	-0.4
4,510,316	-		MIT1002_04022	0.21	-0.9
4,510,347	+		MIT1002_04022	0.25	-0.2
4,510,349	-		MIT1002_04022	0.25	-0.9
4,510,365	+		MIT1002_04022	0.28	-1.1
4,510,401	+		MIT1002_04022	0.33	-0.4
4,510,403	-		MIT1002_04022	0.33	+0.1