Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03626

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
4,051,982	-				-0.2
4,051,984	-				-0.6
4,052,013	-				-0.1
4,052,125	+				-0.7
4,052,125	+				+0.5
4,052,125	+				+0.5
4,052,125	+				-1.2
4,052,125	+				-0.1
4,052,125	+				+0.8
4,052,133	-				-0.3
4,052,133	-				-1.0
4,052,133	-				+0.3
4,052,133	-				-0.3
4,052,133	-				-2.1
4,052,144	+				+1.1
4,052,152	-				-0.4
4,052,333	+				+0.4
4,052,362	+				-0.3
4,052,394	-		MIT1002_03625	0.10	-0.5
4,052,435	-		MIT1002_03625	0.19	+0.5
4,052,613	+		MIT1002_03625	0.55	-0.7
4,052,613	+		MIT1002_03625	0.55	-0.5
4,052,618	+		MIT1002_03625	0.57	-2.3
4,052,705	+		MIT1002_03625	0.75	+0.0
4,052,712	+		MIT1002_03625	0.76	+0.1
4,052,713	-		MIT1002_03625	0.76	-0.2
4,052,770	-		MIT1002_03625	0.88	+0.7
4,052,805	-				+0.9
4,052,842	-				-0.6
4,052,914	-				+0.0
4,052,915	+				-0.1
4,052,915	+				+0.7
4,053,027	-		MIT1002_03626	0.18	-0.3
4,053,096	+		MIT1002_03626	0.29	-0.3
4,053,145	+		MIT1002_03626	0.37	-1.4
4,053,201	+		MIT1002_03626	0.45	-2.3
4,053,312	+		MIT1002_03626	0.63	+0.6
4,053,312	+		MIT1002_03626	0.63	+0.1
4,053,320	-		MIT1002_03626	0.64	-1.1
4,053,320	-		MIT1002_03626	0.64	-0.6
4,053,342	-		MIT1002_03626	0.67	-0.2
4,053,477	-		MIT1002_03626	0.88	-0.2
4,053,479	+		MIT1002_03626	0.89	-1.2
4,053,479	+		MIT1002_03626	0.89	+0.6
4,053,525	-				+0.5
4,053,525	-				+0.8
4,053,625	-				+0.3
4,053,635	+				-0.3
4,053,668	-				-2.5
4,053,683	-				+0.4
4,053,685	+				-0.0
4,053,685	+				-1.7
4,053,690	+				-1.9
4,053,693	-				-1.5
4,053,705	+				+3.2
4,053,707	+				-1.2
4,053,712	+				+0.2
4,053,760	-				-0.9
4,053,762	+				-0.5
4,053,762	+				-0.6
4,053,770	-				+0.7
4,053,781	-				+0.1
4,053,807	-				-0.4
4,053,970	-				-0.5
4,054,127	+		MIT1002_03628	0.82	-1.6
4,054,127	+		MIT1002_03628	0.82	-3.2
4,054,135	-		MIT1002_03628	0.86	-0.8
4,054,155	+				-2.4
4,054,162	-				-3.1
4,054,173	-				+0.8
4,054,204	-				-0.2
4,054,245	+				-2.5
4,054,307	+				+0.2
4,054,307	+				-0.7
4,054,307	+				-3.1
4,054,307	-				-1.5
4,054,315	-				-0.8
4,054,349	-				-2.7
4,054,373	+				-0.7
4,054,373	+				+0.6
4,054,381	-				-0.9
4,054,381	-				-0.4
4,054,381	-				+1.0
4,054,389	-				-0.7