Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03501

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
3,910,920	-				+0.8
3,910,920	-				+0.6
3,911,097	+		MIT1002_03500	0.12	+1.4
3,911,097	+		MIT1002_03500	0.12	+0.2
3,911,107	+		MIT1002_03500	0.13	+0.8
3,911,138	+		MIT1002_03500	0.17	+0.2
3,911,357	+		MIT1002_03500	0.43	-0.1
3,911,414	+		MIT1002_03500	0.50	+1.0
3,911,471	+		MIT1002_03500	0.56	-0.6
3,911,498	-		MIT1002_03500	0.60	-0.4
3,911,531	+		MIT1002_03500	0.63	+0.1
3,911,565	-		MIT1002_03500	0.68	-0.9
3,911,691	-		MIT1002_03500	0.82	-0.3
3,911,952	+				+2.0
3,911,980	+				+1.3
3,912,017	+		MIT1002_03501	0.11	+0.3
3,912,025	-		MIT1002_03501	0.11	+0.7
3,912,069	-		MIT1002_03501	0.15	+0.6
3,912,205	+		MIT1002_03501	0.27	+0.2
3,912,409	-		MIT1002_03501	0.45	-1.4
3,912,589	-		MIT1002_03501	0.60	-1.2
3,912,604	+		MIT1002_03501	0.61	-1.1
3,912,604	+		MIT1002_03501	0.61	-0.1
3,912,604	+		MIT1002_03501	0.61	-2.1
3,912,604	+		MIT1002_03501	0.61	-2.2
3,912,604	+		MIT1002_03501	0.61	-1.0
3,912,604	+		MIT1002_03501	0.61	+0.5
3,912,604	+		MIT1002_03501	0.61	+1.5
3,912,604	+		MIT1002_03501	0.61	-0.1
3,912,604	+		MIT1002_03501	0.61	-0.2
3,912,612	-		MIT1002_03501	0.62	+0.8
3,912,612	-		MIT1002_03501	0.62	-0.4
3,912,612	-		MIT1002_03501	0.62	-2.0
3,912,612	-		MIT1002_03501	0.62	-1.1
3,912,612	-		MIT1002_03501	0.62	+0.2
3,912,612	-		MIT1002_03501	0.62	-1.3
3,912,612	-		MIT1002_03501	0.62	+0.3
3,912,612	-		MIT1002_03501	0.62	-0.1
3,912,612	-		MIT1002_03501	0.62	+0.3
3,912,612	-		MIT1002_03501	0.62	+0.1
3,912,871	+		MIT1002_03501	0.84	+0.0
3,913,021	-				-1.8
3,913,083	+				-1.0
3,913,083	+				+1.9
3,913,091	-				-0.0
3,913,091	-				-0.4
3,913,259	-				+0.7
3,913,266	+				+1.2
3,913,266	+				+1.6
3,913,266	+				+0.8
3,913,266	+				-3.5
3,913,266	+				+1.2
3,913,266	+				+1.4
3,913,266	+				-1.0
3,913,266	+				+0.1
3,913,266	+				+1.1
3,913,266	+				-0.6
3,913,266	+				+1.4
3,913,274	-				+0.4
3,913,274	-				-1.8
3,913,314	+				-0.1
3,913,379	+				+1.4
3,913,400	+		MIT1002_03502	0.13	+0.1
3,913,462	-		MIT1002_03502	0.25	-1.1
3,913,499	-		MIT1002_03502	0.32	-0.2
3,913,523	-		MIT1002_03502	0.37	+0.0
3,913,642	+		MIT1002_03502	0.60	+1.2
3,913,682	-		MIT1002_03502	0.68	+0.2
3,913,713	-		MIT1002_03502	0.74	+0.0
3,913,720	+		MIT1002_03502	0.76	-0.4
3,913,837	+				-0.6
3,913,879	+				+0.3
3,913,925	-				-3.1
3,913,958	-				-0.1
3,913,978	+				-4.0
3,914,023	-				+0.0
3,914,023	-				-0.8
3,914,023	-				+1.5