Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03277

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
3,650,210	+		MIT1002_03275	0.15	+0.1
3,650,210	+		MIT1002_03275	0.15	+1.1
3,650,210	+		MIT1002_03275	0.15	+0.3
3,650,216	+		MIT1002_03275	0.16	-0.9
3,650,216	+		MIT1002_03275	0.16	+0.8
3,650,218	-		MIT1002_03275	0.17	+1.0
3,650,218	-		MIT1002_03275	0.17	+0.7
3,650,218	-		MIT1002_03275	0.17	+0.6
3,650,218	-		MIT1002_03275	0.17	-1.8
3,650,218	-		MIT1002_03275	0.17	+0.2
3,650,218	-		MIT1002_03275	0.17	-0.3
3,650,224	-		MIT1002_03275	0.18	+0.4
3,650,224	-		MIT1002_03275	0.18	-1.5
3,650,230	+		MIT1002_03275	0.20	+0.1
3,650,250	-		MIT1002_03275	0.25	-0.1
3,650,251	-		MIT1002_03275	0.26	-0.9
3,650,252	-		MIT1002_03275	0.26	+0.5
3,650,268	+		MIT1002_03275	0.30	+1.0
3,650,278	+		MIT1002_03275	0.33	-4.0
3,650,280	+		MIT1002_03275	0.33	-0.1
3,650,286	-		MIT1002_03275	0.35	-0.4
3,650,379	-		MIT1002_03275	0.59	-1.7
3,650,420	+		MIT1002_03275	0.70	+1.3
3,650,442	-		MIT1002_03275	0.75	+0.1
3,650,538	-				-0.2
3,650,588	+		MIT1002_03276	0.27	+0.5
3,650,625	-		MIT1002_03276	0.41	+0.3
3,650,632	-		MIT1002_03276	0.44	+0.9
3,650,632	-		MIT1002_03276	0.44	+0.9
3,650,722	-		MIT1002_03276	0.78	+0.6
3,650,722	-		MIT1002_03276	0.78	+3.7
3,650,722	-		MIT1002_03276	0.78	-2.3
3,650,737	+		MIT1002_03276	0.83	+2.1
3,650,805	+				-2.9
3,650,805	+				-0.0
3,650,817	+				-0.2
3,650,999	+				-0.1
3,651,160	+		MIT1002_03277	0.21	+0.5
3,651,168	+		MIT1002_03277	0.22	+0.7
3,651,175	+		MIT1002_03277	0.22	-1.9
3,651,219	-		MIT1002_03277	0.27	-0.5
3,651,224	-		MIT1002_03277	0.28	+0.4
3,651,252	-		MIT1002_03277	0.31	+1.6
3,651,361	+		MIT1002_03277	0.42	-2.0
3,651,501	-		MIT1002_03277	0.57	+0.0
3,651,520	+		MIT1002_03277	0.59	+1.5
3,651,576	+		MIT1002_03277	0.65	-0.3
3,651,594	+		MIT1002_03277	0.67	+1.1
3,651,604	-		MIT1002_03277	0.68	+0.3
3,651,773	+		MIT1002_03277	0.86	+1.5
3,651,842	-				-2.5
3,651,973	-				-2.0
3,652,029	+				-1.1
3,652,048	-				-0.5
3,652,048	-				-1.0
3,652,056	+				-0.6
3,652,064	-				+0.7
3,652,095	+		MIT1002_03278	0.10	-0.4
3,652,100	+		MIT1002_03278	0.11	-0.0
3,652,168	+		MIT1002_03278	0.25	-0.7
3,652,225	+		MIT1002_03278	0.37	+1.0
3,652,255	+		MIT1002_03278	0.43	-1.6
3,652,255	+		MIT1002_03278	0.43	-2.0
3,652,255	+		MIT1002_03278	0.43	+1.5
3,652,263	-		MIT1002_03278	0.44	-1.0
3,652,263	-		MIT1002_03278	0.44	-1.5
3,652,308	-		MIT1002_03278	0.53	-0.3
3,652,440	-		MIT1002_03278	0.80	+0.9
3,652,447	-		MIT1002_03278	0.81	-0.9
3,652,457	-		MIT1002_03278	0.83	-1.4
3,652,566	+				-2.7
3,652,586	+				-0.1
3,652,661	+				+0.2
3,652,734	-				+0.4
3,652,744	-				+0.1
3,652,791	+				+0.5
3,652,791	+				-0.3
3,652,840	-				-1.0
3,652,881	+				-1.7
3,652,886	+				-2.4