Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03187

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
3,550,710	-		MIT1002_03186	0.37	+0.7
3,550,748	-		MIT1002_03186	0.40	-2.4
3,550,949	+		MIT1002_03186	0.54	-1.0
3,550,997	+		MIT1002_03186	0.58	-2.6
3,550,997	+		MIT1002_03186	0.58	-3.1
3,550,997	+		MIT1002_03186	0.58	-1.6
3,550,997	+		MIT1002_03186	0.58	-3.0
3,551,005	-		MIT1002_03186	0.58	-2.7
3,551,260	-		MIT1002_03186	0.76	+0.3
3,551,311	+		MIT1002_03186	0.80	-2.5
3,551,494	+				-0.7
3,551,512	-				-2.4
3,551,541	-				-1.5
3,551,586	+				+0.7
3,551,586	+				+1.8
3,551,636	+				-0.3
3,551,658	-				-1.1
3,551,680	+				-3.9
3,551,699	+				+2.3
3,551,699	+				-0.1
3,551,704	+				-0.8
3,551,707	-				-1.2
3,551,731	-				+1.6
3,551,942	+		MIT1002_03187	0.25	+0.4
3,551,950	-		MIT1002_03187	0.26	-0.3
3,551,950	-		MIT1002_03187	0.26	+1.0
3,551,976	-		MIT1002_03187	0.28	-2.7
3,551,986	-		MIT1002_03187	0.29	-0.3
3,551,986	-		MIT1002_03187	0.29	-0.3
3,551,986	-		MIT1002_03187	0.29	-0.7
3,552,044	-		MIT1002_03187	0.34	+0.3
3,552,166	+		MIT1002_03187	0.45	-0.6
3,552,169	-		MIT1002_03187	0.45	-0.7
3,552,181	-		MIT1002_03187	0.46	-0.1
3,552,185	+		MIT1002_03187	0.46	-1.5
3,552,185	+		MIT1002_03187	0.46	+0.0
3,552,193	-		MIT1002_03187	0.47	-2.8
3,552,193	-		MIT1002_03187	0.47	-1.9
3,552,193	-		MIT1002_03187	0.47	-1.0
3,552,193	-		MIT1002_03187	0.47	-0.2
3,552,314	-		MIT1002_03187	0.58	+0.2
3,552,482	+		MIT1002_03187	0.73	-1.7
3,552,492	+		MIT1002_03187	0.73	-0.3
3,552,500	-		MIT1002_03187	0.74	-0.8
3,552,500	-		MIT1002_03187	0.74	+0.1
3,552,501	+		MIT1002_03187	0.74	+0.9
3,552,523	+		MIT1002_03187	0.76	-0.3
3,552,536	+		MIT1002_03187	0.77	+0.4
3,552,545	-		MIT1002_03187	0.78	-1.5
3,552,622	-		MIT1002_03187	0.85	+0.3
3,552,646	-		MIT1002_03187	0.87	-0.0
3,552,682	-				+0.1
3,552,715	+				+0.3
3,552,873	-				+0.9
3,552,873	-				+2.5
3,552,873	-				+0.1
3,552,881	-				+0.3
3,552,883	-				+1.4
3,552,909	+				-1.3
3,552,944	+				+1.9
3,552,969	-				-0.6
3,552,976	+				+0.5
3,553,216	+		MIT1002_03188	0.30	+0.2
3,553,224	-		MIT1002_03188	0.31	-0.3
3,553,253	-		MIT1002_03188	0.35	-0.2
3,553,317	+		MIT1002_03188	0.44	+1.5
3,553,423	+		MIT1002_03188	0.58	+1.0
3,553,465	+		MIT1002_03188	0.64	-3.2
3,553,497	+		MIT1002_03188	0.68	-0.7
3,553,686	+				-0.5
3,553,696	-				-1.0