Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02923

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
3,247,402	+				+0.3
3,247,423	+				-0.1
3,247,423	+				+0.7
3,247,431	-				-0.2
3,247,431	-				+1.2
3,247,435	+				-0.1
3,247,443	-				+0.8
3,247,482	+				+0.4
3,247,482	+				+1.8
3,247,490	-				+0.4
3,247,512	-				-0.1
3,247,522	+				-0.2
3,247,564	+				-1.1
3,247,608	-				-0.0
3,247,719	-		MIT1002_02922	0.13	-0.8
3,247,743	+		MIT1002_02922	0.17	-0.4
3,247,757	-		MIT1002_02922	0.19	+0.3
3,247,813	+		MIT1002_02922	0.29	+1.2
3,247,813	+		MIT1002_02922	0.29	+0.2
3,247,813	+		MIT1002_02922	0.29	+2.7
3,247,813	+		MIT1002_02922	0.29	+0.5
3,247,813	+		MIT1002_02922	0.29	-0.6
3,247,829	+		MIT1002_02922	0.32	-1.1
3,247,829	+		MIT1002_02922	0.32	+0.0
3,247,898	+		MIT1002_02922	0.44	-0.0
3,247,906	-		MIT1002_02922	0.45	-0.8
3,247,906	-		MIT1002_02922	0.45	-0.0
3,247,946	+		MIT1002_02922	0.52	-0.8
3,247,981	-		MIT1002_02922	0.58	-0.3
3,247,981	-		MIT1002_02922	0.58	+1.1
3,247,988	-		MIT1002_02922	0.60	-0.2
3,248,094	+		MIT1002_02922	0.78	+1.3
3,248,097	-		MIT1002_02922	0.78	+0.1
3,248,127	+		MIT1002_02922	0.84	-0.3
3,248,135	-		MIT1002_02922	0.85	-3.6
3,248,220	+				+0.1
3,248,220	+				-0.2
3,248,227	-				+0.5
3,248,243	+				-0.8
3,248,273	+				+0.4
3,248,353	+				+1.4
3,248,353	+				+1.2
3,248,377	+				+0.4
3,248,377	+				+0.2
3,248,385	-				-0.1
3,248,385	-				+0.3
3,248,397	-				+0.0
3,248,457	-				+0.7
3,248,485	-		MIT1002_02923	0.13	-0.5
3,248,506	+		MIT1002_02923	0.17	+1.4
3,248,514	-		MIT1002_02923	0.18	+0.4
3,248,536	+		MIT1002_02923	0.21	-1.5
3,248,548	+		MIT1002_02923	0.23	+0.5
3,248,549	+		MIT1002_02923	0.23	+1.7
3,248,621	+		MIT1002_02923	0.34	+0.3
3,248,694	-		MIT1002_02923	0.45	+1.2
3,248,703	+		MIT1002_02923	0.47	+0.8
3,248,711	-		MIT1002_02923	0.48	-1.0
3,248,711	-		MIT1002_02923	0.48	-0.4
3,248,711	-		MIT1002_02923	0.48	-0.9
3,248,717	-		MIT1002_02923	0.49	-0.0
3,248,727	-		MIT1002_02923	0.50	+1.2
3,248,789	+		MIT1002_02923	0.60	+1.7
3,248,816	-		MIT1002_02923	0.64	-0.8
3,248,817	-		MIT1002_02923	0.64	+0.0
3,248,892	+		MIT1002_02923	0.75	+1.6
3,248,953	-		MIT1002_02923	0.84	-0.7
3,248,960	-		MIT1002_02923	0.85	+1.2
3,249,188	-				-0.3
3,249,194	-				+0.3
3,249,221	+				-1.9
3,249,301	+				+0.2
3,249,301	-				+0.9
3,249,322	+				-3.0
3,249,357	+				-1.3
3,249,365	-				+1.0
3,249,365	-				-2.5
3,249,421	-				+0.3
3,249,457	+		MIT1002_02924	0.12	+0.5
3,249,465	-		MIT1002_02924	0.12	-1.6
3,249,499	-		MIT1002_02924	0.14	-0.0
3,249,514	-		MIT1002_02924	0.15	+1.4
3,249,567	+		MIT1002_02924	0.17	+0.2
3,249,646	-		MIT1002_02924	0.21	+0.1
3,249,655	+		MIT1002_02924	0.22	+0.9
3,249,683	+		MIT1002_02924	0.23	-1.6
3,249,721	+		MIT1002_02924	0.25	-0.2
3,249,721	+		MIT1002_02924	0.25	+2.0
3,249,729	+		MIT1002_02924	0.25	+0.9
3,249,990	-		MIT1002_02924	0.39	+0.3
3,250,041	+		MIT1002_02924	0.41	+0.6
3,250,049	-		MIT1002_02924	0.41	-0.5