Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02891

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
3,213,506	+		MIT1002_02890	0.73	-0.7
3,213,506	+		MIT1002_02890	0.73	+0.5
3,213,514	-		MIT1002_02890	0.73	-1.2
3,213,514	-		MIT1002_02890	0.73	-0.0
3,213,520	-		MIT1002_02890	0.73	+0.8
3,213,673	+		MIT1002_02890	0.79	+0.1
3,213,738	+		MIT1002_02890	0.81	-0.7
3,213,830	+		MIT1002_02890	0.84	-0.5
3,213,932	-		MIT1002_02890	0.88	-1.2
3,213,972	-		MIT1002_02890	0.89	-3.6
3,214,010	+				-0.2
3,214,022	-				-0.1
3,214,091	+				+1.3
3,214,157	+				-0.1
3,214,157	+				-0.0
3,214,157	+				+0.3
3,214,157	+				+0.6
3,214,157	+				+0.0
3,214,157	+				+0.4
3,214,157	+				-0.5
3,214,157	+				+0.9
3,214,165	-				-0.1
3,214,165	-				+0.1
3,214,165	-				+1.3
3,214,165	-				-2.0
3,214,165	-				+1.6
3,214,178	+				-0.8
3,214,178	+				+1.9
3,214,186	-				-1.9
3,214,186	-				-2.2
3,214,186	-				-0.2
3,214,186	-				+1.4
3,214,228	+				-0.4
3,214,255	+				-0.6
3,214,276	-				+0.9
3,214,302	-				-3.5
3,214,333	+				-1.1
3,214,333	+				-0.3
3,214,333	+				+0.2
3,214,333	+				-0.1
3,214,333	+				+0.0
3,214,341	-				+0.3
3,214,341	-				+0.3
3,214,341	-				-0.5
3,214,341	-				+0.1
3,214,341	-				+0.1
3,214,341	-				+0.2
3,214,376	+				-3.4
3,214,395	+				-0.4
3,214,486	+				-0.2
3,214,503	+				-0.1
3,214,515	+				-1.6
3,214,556	-				+1.2
3,214,569	+				-0.4
3,214,600	+		MIT1002_02891	0.11	-2.4
3,214,708	+		MIT1002_02891	0.18	-0.8
3,214,716	+		MIT1002_02891	0.18	-0.5
3,214,718	+		MIT1002_02891	0.18	-0.2
3,214,723	+		MIT1002_02891	0.19	-0.3
3,214,750	-		MIT1002_02891	0.21	+0.8
3,214,785	+		MIT1002_02891	0.23	+1.5
3,214,800	-		MIT1002_02891	0.24	+0.4
3,214,867	-		MIT1002_02891	0.28	+0.2
3,215,007	-		MIT1002_02891	0.38	-2.8
3,215,007	-		MIT1002_02891	0.38	+0.7
3,215,119	+		MIT1002_02891	0.45	+0.4
3,215,148	+		MIT1002_02891	0.47	+0.0
3,215,178	-		MIT1002_02891	0.49	+0.8
3,215,178	-		MIT1002_02891	0.49	-1.5
3,215,178	-		MIT1002_02891	0.49	+0.4
3,215,178	-		MIT1002_02891	0.49	+0.8
3,215,275	+		MIT1002_02891	0.55	-0.6
3,215,370	+		MIT1002_02891	0.62	-0.3
3,215,378	-		MIT1002_02891	0.62	+0.1
3,215,490	-		MIT1002_02891	0.70	-0.6
3,215,592	+		MIT1002_02891	0.77	+1.3
3,215,648	-		MIT1002_02891	0.80	-0.9
3,215,648	-		MIT1002_02891	0.80	-2.6
3,215,673	+		MIT1002_02891	0.82	-0.5
3,215,719	-		MIT1002_02891	0.85	+0.6
3,215,725	-		MIT1002_02891	0.85	-0.6
3,215,768	-		MIT1002_02891	0.88	-1.6
3,215,801	+				+0.2
3,215,801	+				+0.5
3,215,801	+				+1.2
3,215,809	-				-0.7
3,215,945	-				+0.4
3,215,946	-				+2.1
3,215,957	+				-0.3
3,215,964	-				-0.1
3,215,965	-				-0.5
3,215,965	-				-0.8
3,215,966	-				-1.8
3,215,994	+				-0.6
3,216,001	-				-0.3
3,216,112	+		MIT1002_02892	0.15	-0.0
3,216,213	+		MIT1002_02892	0.25	+0.4
3,216,232	+		MIT1002_02892	0.27	-0.9
3,216,245	-		MIT1002_02892	0.28	-2.7
3,216,267	+		MIT1002_02892	0.30	-1.6
3,216,286	+		MIT1002_02892	0.32	-4.5
3,216,358	-		MIT1002_02892	0.39	-2.9
3,216,433	-		MIT1002_02892	0.46	-2.1
3,216,603	-		MIT1002_02892	0.63	-0.8
3,216,829	-		MIT1002_02892	0.85	-2.0
3,216,935	+				+0.5