Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02886

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
3,203,716	-		MIT1002_02885	0.65	+0.4
3,203,718	+		MIT1002_02885	0.65	-0.5
3,203,721	-		MIT1002_02885	0.65	+0.3
3,203,747	+		MIT1002_02885	0.66	+0.9
3,203,836	+		MIT1002_02885	0.70	-0.2
3,203,836	+		MIT1002_02885	0.70	-3.2
3,203,886	-		MIT1002_02885	0.73	-1.5
3,203,900	+		MIT1002_02885	0.73	-0.9
3,203,948	-		MIT1002_02885	0.75	-0.7
3,203,950	-		MIT1002_02885	0.75	-4.2
3,203,981	+		MIT1002_02885	0.77	-0.6
3,203,996	-		MIT1002_02885	0.78	-1.4
3,204,027	-		MIT1002_02885	0.79	+0.6
3,204,092	-		MIT1002_02885	0.82	-0.9
3,204,106	-		MIT1002_02885	0.82	-1.0
3,204,156	-		MIT1002_02885	0.85	-1.2
3,204,250	+		MIT1002_02885	0.89	-1.6
3,204,296	+				+0.4
3,204,304	-				-0.5
3,204,326	+				-0.1
3,204,447	+				-0.1
3,204,548	-				-0.3
3,204,571	-				-0.9
3,204,596	-				-0.5
3,204,601	-				+0.7
3,204,601	-				-0.5
3,204,604	+				+1.2
3,204,636	+				-0.0
3,204,730	+		MIT1002_02886	0.12	+0.1
3,204,738	-		MIT1002_02886	0.13	+1.6
3,204,739	+		MIT1002_02886	0.13	+0.9
3,204,747	-		MIT1002_02886	0.14	+0.6
3,204,829	-		MIT1002_02886	0.26	-0.4
3,204,923	+		MIT1002_02886	0.39	-0.1
3,204,923	+		MIT1002_02886	0.39	-0.0
3,204,929	-		MIT1002_02886	0.39	-0.5
3,204,933	+		MIT1002_02886	0.40	-1.1
3,204,933	+		MIT1002_02886	0.40	-0.1
3,204,965	+		MIT1002_02886	0.44	+1.0
3,204,965	+		MIT1002_02886	0.44	+1.8
3,204,965	+		MIT1002_02886	0.44	+1.1
3,204,973	-		MIT1002_02886	0.46	+0.8
3,204,973	-		MIT1002_02886	0.46	+0.1
3,204,983	-		MIT1002_02886	0.47	+1.4
3,205,009	-		MIT1002_02886	0.51	+0.1
3,205,018	-		MIT1002_02886	0.52	+1.7
3,205,110	+		MIT1002_02886	0.65	-0.0
3,205,199	+		MIT1002_02886	0.77	-0.5
3,205,207	-		MIT1002_02886	0.78	-0.0
3,205,236	+		MIT1002_02886	0.82	+0.3
3,205,244	-		MIT1002_02886	0.83	+0.2
3,205,338	+				-1.1
3,205,338	+				-0.7
3,205,346	-				+0.5
3,205,346	-				-0.8
3,205,346	-				-1.2
3,205,427	-				-0.4
3,205,462	+				+0.2
3,205,462	+				-0.1
3,205,473	-				-0.4
3,205,496	+				+0.7
3,205,576	+				-0.9
3,205,576	+				+1.1
3,205,613	-				-0.5
3,205,632	+				+0.8
3,205,633	+				-0.3
3,205,633	+				+1.1
3,205,634	+				-0.4
3,205,634	+				+0.8
3,205,634	+				-3.4
3,205,642	-				-0.9
3,205,642	-				+1.7
3,205,642	-				-2.0
3,205,642	-				+0.0
3,205,642	-				+0.4
3,205,642	-				-1.8
3,205,642	-				+1.3
3,205,642	-				+0.4
3,205,642	-				-3.0
3,205,654	+				+1.1
3,205,679	-				+0.9
3,205,681	+				+0.3
3,205,681	+				+1.4
3,205,689	-		MIT1002_02887	0.10	-0.7
3,205,730	-		MIT1002_02887	0.12	+1.0
3,205,756	-		MIT1002_02887	0.13	+0.3
3,205,766	-		MIT1002_02887	0.13	+0.2
3,205,833	+		MIT1002_02887	0.16	-2.3
3,205,932	+		MIT1002_02887	0.20	+0.9
3,205,967	-		MIT1002_02887	0.21	+0.5
3,205,982	-		MIT1002_02887	0.22	+0.1
3,205,998	+		MIT1002_02887	0.22	+0.7
3,206,031	-		MIT1002_02887	0.24	-0.2
3,206,125	-		MIT1002_02887	0.27	+0.3
3,206,162	-		MIT1002_02887	0.29	+1.2
3,206,173	-		MIT1002_02887	0.29	-0.5
3,206,181	+		MIT1002_02887	0.30	+2.6
3,206,310	-		MIT1002_02887	0.35	-0.1
3,206,357	+		MIT1002_02887	0.37	-0.5