Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02643

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
2,937,077	-		MIT1002_02642	0.79	+1.0
2,937,106	-		MIT1002_02642	0.80	+1.1
2,937,133	+		MIT1002_02642	0.81	+0.2
2,937,141	-		MIT1002_02642	0.81	+0.7
2,937,213	-		MIT1002_02642	0.83	-3.3
2,937,262	+		MIT1002_02642	0.85	-3.1
2,937,290	-		MIT1002_02642	0.86	+0.6
2,937,434	-				+0.0
2,937,453	-				+0.4
2,937,466	+				+1.0
2,937,466	+				-0.3
2,937,467	+				+0.4
2,937,467	+				+0.5
2,937,475	-				-0.9
2,937,496	-				+1.5
2,937,512	+				+0.5
2,937,515	-				+0.1
2,937,520	-				+0.6
2,937,574	+				+1.4
2,937,636	+				-0.1
2,937,641	+				+0.3
2,937,664	-				+0.7
2,937,664	-				-1.0
2,937,671	+				-0.1
2,937,696	-				+0.6
2,937,696	-				+0.2
2,937,698	-				-1.8
2,937,732	-				-0.6
2,937,892	+				-0.5
2,937,900	-				+0.2
2,938,082	-				-1.4
2,938,165	+		MIT1002_02643	0.15	+0.2
2,938,176	+		MIT1002_02643	0.17	-1.4
2,938,176	+		MIT1002_02643	0.17	-2.8
2,938,176	+		MIT1002_02643	0.17	-0.3
2,938,179	+		MIT1002_02643	0.18	-0.1
2,938,179	+		MIT1002_02643	0.18	+0.2
2,938,184	-		MIT1002_02643	0.18	+0.8
2,938,184	-		MIT1002_02643	0.18	-2.3
2,938,187	-		MIT1002_02643	0.19	+1.4
2,938,199	-		MIT1002_02643	0.21	+0.5
2,938,322	+		MIT1002_02643	0.40	-0.6
2,938,336	+		MIT1002_02643	0.42	+0.2
2,938,473	+		MIT1002_02643	0.64	-0.2
2,938,480	+		MIT1002_02643	0.65	-0.0
2,938,500	-		MIT1002_02643	0.68	+0.6
2,938,509	+		MIT1002_02643	0.69	-2.1
2,938,724	+				-0.3
2,938,724	+				+0.7
2,938,782	+				-2.1
2,938,782	+				-0.8
2,938,790	-				+1.9
2,938,837	+				+0.4
2,938,946	+				+1.2
2,939,242	+				+1.4
2,939,273	-				-0.4
2,939,319	-				+0.8
2,939,352	-				+1.1
2,939,359	-				+0.5
2,939,385	+				-2.2
2,939,478	-		MIT1002_02644	0.13	-0.4
2,939,648	-		MIT1002_02644	0.19	+1.1
2,939,701	+		MIT1002_02644	0.21	+0.7