Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02381

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
2,658,238	+		MIT1002_02380	0.65	-1.1
2,658,242	-		MIT1002_02380	0.65	+0.2
2,658,289	-		MIT1002_02380	0.67	-0.0
2,658,323	+		MIT1002_02380	0.69	+0.7
2,658,331	-		MIT1002_02380	0.69	+0.2
2,658,331	-		MIT1002_02380	0.69	-0.3
2,658,332	+		MIT1002_02380	0.69	-1.9
2,658,346	+		MIT1002_02380	0.70	-0.4
2,658,377	-		MIT1002_02380	0.71	+0.7
2,658,395	+		MIT1002_02380	0.72	+1.1
2,658,429	+		MIT1002_02380	0.74	-0.4
2,658,544	+		MIT1002_02380	0.79	-0.1
2,658,547	-		MIT1002_02380	0.79	+0.4
2,658,643	+		MIT1002_02380	0.84	-1.9
2,658,650	-		MIT1002_02380	0.84	-0.7
2,658,704	+		MIT1002_02380	0.87	-0.4
2,658,725	+		MIT1002_02380	0.88	+1.6
2,658,731	-		MIT1002_02380	0.88	+0.3
2,658,733	-		MIT1002_02380	0.88	-0.7
2,658,733	-		MIT1002_02380	0.88	-0.9
2,658,744	+		MIT1002_02380	0.89	-0.9
2,658,746	+		MIT1002_02380	0.89	-1.3
2,658,792	+				+1.5
2,658,800	-				+0.1
2,658,800	-				-0.5
2,658,800	-				-0.3
2,658,823	-				+1.2
2,658,906	+				+0.5
2,658,906	+				+0.4
2,658,917	-				-0.9
2,658,929	-				+0.2
2,658,931	+				+0.2
2,658,931	+				-0.2
2,658,931	+				-0.6
2,658,931	+				+0.2
2,658,939	-				-0.8
2,658,939	-				+0.4
2,659,001	-				-0.5
2,659,008	-				-1.2
2,659,027	-				+0.6
2,659,063	+				+0.6
2,659,065	+				-1.1
2,659,071	-				-0.7
2,659,073	-				-0.8
2,659,083	-				+0.5
2,659,197	+				+0.3
2,659,348	-		MIT1002_02381	0.43	-1.7
2,659,373	+		MIT1002_02381	0.50	-1.8
2,659,373	+		MIT1002_02381	0.50	-1.1
2,659,444	-		MIT1002_02381	0.72	-3.6
2,659,505	+				+2.6
2,659,662	-		MIT1002_02382	0.22	+0.1
2,659,674	+		MIT1002_02382	0.25	+0.6
2,659,684	-		MIT1002_02382	0.26	-1.9
2,659,693	+		MIT1002_02382	0.28	+0.4
2,659,701	-		MIT1002_02382	0.30	+0.6
2,659,711	+		MIT1002_02382	0.31	+0.6
2,659,711	+		MIT1002_02382	0.31	+0.2
2,659,769	-		MIT1002_02382	0.42	+1.5
2,659,769	-		MIT1002_02382	0.42	-1.9
2,659,769	-		MIT1002_02382	0.42	-1.5
2,659,769	-		MIT1002_02382	0.42	+0.8
2,659,804	+		MIT1002_02382	0.49	-0.5
2,659,812	-		MIT1002_02382	0.50	+0.7
2,659,917	+		MIT1002_02382	0.70	-1.3
2,659,922	+		MIT1002_02382	0.71	-0.7
2,659,983	-		MIT1002_02382	0.82	+0.3
2,659,985	+		MIT1002_02382	0.82	+1.4
2,660,093	+				+0.8
2,660,218	+		MIT1002_02383	0.33	-0.9
2,660,237	-		MIT1002_02383	0.40	+1.2
2,660,242	+		MIT1002_02383	0.42	+0.3
2,660,261	+		MIT1002_02383	0.50	+0.0
2,660,273	-		MIT1002_02383	0.54	+0.8
2,660,295	-		MIT1002_02383	0.63	-1.3
2,660,357	+		MIT1002_02383	0.87	+0.1
2,660,365	-				+0.7
2,660,365	-				-0.5
2,660,365	-				+0.5
2,660,365	-				+0.8
2,660,365	-				+1.1
2,660,396	+				-0.1
2,660,396	+				+0.0
2,660,461	+				+1.1
2,660,461	+				+0.1
2,660,469	-				-3.2
2,660,473	+		MIT1002_02384	0.10	+0.9
2,660,480	-		MIT1002_02384	0.11	-0.5
2,660,515	-		MIT1002_02384	0.17	+1.6
2,660,527	-		MIT1002_02384	0.19	+0.9