Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02346

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
2,612,838	+		MIT1002_02345	0.22	+0.6
2,612,838	+		MIT1002_02345	0.22	-1.2
2,612,904	+		MIT1002_02345	0.28	+0.7
2,612,904	+		MIT1002_02345	0.28	-0.4
2,612,909	-		MIT1002_02345	0.28	+1.1
2,612,912	-		MIT1002_02345	0.28	+0.8
2,612,921	+		MIT1002_02345	0.29	-0.4
2,612,929	-		MIT1002_02345	0.30	+0.8
2,612,935	-		MIT1002_02345	0.30	+0.3
2,613,000	-		MIT1002_02345	0.36	-2.1
2,613,039	+		MIT1002_02345	0.39	+0.6
2,613,210	-		MIT1002_02345	0.54	+0.0
2,613,250	+		MIT1002_02345	0.57	+1.1
2,613,250	+		MIT1002_02345	0.57	+1.4
2,613,351	+		MIT1002_02345	0.66	+0.7
2,613,358	-		MIT1002_02345	0.66	+0.2
2,613,359	-		MIT1002_02345	0.66	+0.3
2,613,404	+		MIT1002_02345	0.70	+1.3
2,613,407	-		MIT1002_02345	0.70	-0.2
2,613,445	-		MIT1002_02345	0.74	+0.3
2,613,469	+		MIT1002_02345	0.76	-0.8
2,613,591	-		MIT1002_02345	0.86	-0.4
2,613,813	+				-2.6
2,613,881	-				-1.3
2,613,907	+				+0.1
2,613,936	-				-0.4
2,613,943	+				-1.4
2,614,043	-		MIT1002_02346	0.18	+1.2
2,614,089	+		MIT1002_02346	0.22	+0.9
2,614,097	+		MIT1002_02346	0.23	+1.1
2,614,105	-		MIT1002_02346	0.23	+0.9
2,614,116	+		MIT1002_02346	0.24	-0.5
2,614,173	+		MIT1002_02346	0.29	+0.2
2,614,181	-		MIT1002_02346	0.30	+0.4
2,614,205	+		MIT1002_02346	0.32	-1.6
2,614,214	-		MIT1002_02346	0.33	-1.8
2,614,238	-		MIT1002_02346	0.35	+0.8
2,614,249	-		MIT1002_02346	0.36	+0.4
2,614,274	+		MIT1002_02346	0.38	-0.0
2,614,276	+		MIT1002_02346	0.38	-2.5
2,614,282	+		MIT1002_02346	0.38	+0.6
2,614,282	-		MIT1002_02346	0.38	+0.9
2,614,322	+		MIT1002_02346	0.42	+0.6
2,614,345	-		MIT1002_02346	0.44	-0.1
2,614,420	+		MIT1002_02346	0.50	+1.4
2,614,422	+		MIT1002_02346	0.50	+0.8
2,614,476	-		MIT1002_02346	0.55	+0.1
2,614,528	+		MIT1002_02346	0.59	+0.5
2,614,528	+		MIT1002_02346	0.59	+0.7
2,614,536	-		MIT1002_02346	0.60	+0.4
2,614,536	-		MIT1002_02346	0.60	-0.8
2,614,536	-		MIT1002_02346	0.60	+0.8
2,614,541	-		MIT1002_02346	0.60	+0.2
2,614,551	-		MIT1002_02346	0.61	-0.1
2,614,561	+		MIT1002_02346	0.62	-0.2
2,614,581	+		MIT1002_02346	0.64	-0.5
2,614,581	+		MIT1002_02346	0.64	+0.9
2,614,708	+		MIT1002_02346	0.74	+1.2
2,614,708	+		MIT1002_02346	0.74	+1.1
2,614,722	-		MIT1002_02346	0.76	-0.4
2,614,733	+		MIT1002_02346	0.76	+0.8
2,614,733	+		MIT1002_02346	0.76	+0.1
2,614,799	-		MIT1002_02346	0.82	+0.5
2,614,822	+		MIT1002_02346	0.84	+0.5
2,614,839	+		MIT1002_02346	0.85	+0.9
2,614,861	-		MIT1002_02346	0.87	+0.2
2,614,952	+				+0.6
2,615,029	-				-0.5
2,615,029	-				+0.2
2,615,171	+				-2.3
2,615,182	-				+0.2
2,615,249	-				+0.6
2,615,249	-				-0.3
2,615,273	+				+0.5
2,615,298	+				+1.3
2,615,298	+				-0.6
2,615,298	+				+0.3
2,615,390	-				-0.4
2,615,451	-		MIT1002_02347	0.27	-0.8
2,615,577	-		MIT1002_02347	0.74	-0.8
2,615,577	-		MIT1002_02347	0.74	-0.1
2,615,764	+				+0.7
2,615,772	-				-0.6
2,615,792	-				+0.3