Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02238

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
2,500,864	+				-0.0
2,500,872	-				+0.9
2,500,872	-				+0.2
2,500,937	-				-0.4
2,501,011	+				+0.3
2,501,046	-		MIT1002_02238	0.11	+0.6
2,501,074	+		MIT1002_02238	0.17	+1.9
2,501,110	+		MIT1002_02238	0.25	+0.0
2,501,110	+		MIT1002_02238	0.25	-0.1
2,501,115	+		MIT1002_02238	0.26	-0.3
2,501,212	+		MIT1002_02238	0.47	+1.4
2,501,234	-		MIT1002_02238	0.52	-0.3
2,501,234	-		MIT1002_02238	0.52	-1.8
2,501,236	-		MIT1002_02238	0.52	+1.0
2,501,245	+		MIT1002_02238	0.54	+0.0
2,501,275	-		MIT1002_02238	0.61	-2.1
2,501,288	+		MIT1002_02238	0.64	+0.3
2,501,295	-		MIT1002_02238	0.65	+1.0
2,501,301	-		MIT1002_02238	0.66	-2.0
2,501,387	+		MIT1002_02238	0.85	-2.1
2,501,387	+		MIT1002_02238	0.85	+0.3
2,501,387	+		MIT1002_02238	0.85	-1.2
2,501,387	+		MIT1002_02238	0.85	+0.1
2,501,387	+		MIT1002_02238	0.85	-0.9
2,501,387	+		MIT1002_02238	0.85	-0.2
2,501,387	+		MIT1002_02238	0.85	-1.8
2,501,387	+		MIT1002_02238	0.85	-0.7
2,501,387	+		MIT1002_02238	0.85	-0.8
2,501,390	-		MIT1002_02238	0.86	-0.0
2,501,395	-		MIT1002_02238	0.87	+0.0
2,501,395	-		MIT1002_02238	0.87	-0.8
2,501,395	-		MIT1002_02238	0.87	-0.3
2,501,395	-		MIT1002_02238	0.87	-0.8
2,501,395	-		MIT1002_02238	0.87	-0.3
2,501,395	-		MIT1002_02238	0.87	+0.4
2,501,395	-		MIT1002_02238	0.87	-0.7
2,501,395	-		MIT1002_02238	0.87	+1.2
2,501,395	-		MIT1002_02238	0.87	+0.2
2,501,421	-				+1.2
2,501,456	+				-1.4
2,501,456	+				+0.3
2,501,618	+				-0.8
2,501,618	+				-0.9
2,501,626	-				-3.0
2,501,667	+				-1.0
2,501,764	+				-0.5
2,501,764	-				-0.6
2,501,850	-				-0.8
2,501,951	-				-1.9
2,501,968	+				+0.6
2,501,979	-				+0.1