Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01299

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
1,442,733	-		MIT1002_01298	0.74	+0.8
1,442,787	-		MIT1002_01298	0.76	+1.4
1,442,792	-		MIT1002_01298	0.76	-0.1
1,442,806	+		MIT1002_01298	0.76	-2.4
1,442,812	-		MIT1002_01298	0.76	-1.4
1,442,812	-		MIT1002_01298	0.76	+1.8
1,442,824	-		MIT1002_01298	0.77	+0.3
1,442,854	-		MIT1002_01298	0.78	+1.1
1,442,854	-		MIT1002_01298	0.78	+0.6
1,442,866	+		MIT1002_01298	0.78	-0.8
1,442,874	-		MIT1002_01298	0.78	+0.1
1,442,916	+		MIT1002_01298	0.79	+1.1
1,443,055	+		MIT1002_01298	0.83	+0.4
1,443,146	+		MIT1002_01298	0.85	+1.6
1,443,232	-		MIT1002_01298	0.88	-0.6
1,443,265	+		MIT1002_01298	0.89	-2.5
1,443,282	+		MIT1002_01298	0.89	+1.1
1,443,290	-		MIT1002_01298	0.89	-0.4
1,443,416	-				+0.7
1,443,516	+				+0.1
1,443,516	+				-0.9
1,443,524	-				-1.3
1,443,524	-				-2.6
1,443,602	-				-0.6
1,443,614	+				+0.9
1,443,614	+				-2.2
1,443,614	+				-2.2
1,443,614	+				-1.6
1,443,622	-				+0.0
1,443,649	+				+0.8
1,443,657	-				-2.9
1,443,670	+				+1.5
1,443,678	-				-1.4
1,443,696	+				-0.3
1,443,703	+				-2.7
1,443,703	+				-1.9
1,443,704	-				-0.6
1,444,010	-		MIT1002_01299	0.51	-1.1
1,444,066	-		MIT1002_01299	0.60	-3.1
1,444,175	+		MIT1002_01299	0.77	-2.0
1,444,294	-				-1.8
1,444,294	-				+1.4
1,444,294	-				-0.4
1,444,336	-				+1.5
1,444,439	-				+0.8
1,444,439	-				-1.1
1,444,474	-		MIT1002_01300	0.13	-2.5
1,444,831	+		MIT1002_01300	0.42	+1.7
1,444,908	+		MIT1002_01300	0.48	+1.7
1,444,934	+		MIT1002_01300	0.50	+0.3
1,444,950	-		MIT1002_01300	0.52	+1.6
1,444,994	+		MIT1002_01300	0.55	-3.0
1,445,014	+		MIT1002_01300	0.57	+0.5
1,445,042	-		MIT1002_01300	0.59	+1.1
1,445,133	+		MIT1002_01300	0.67	-2.2
1,445,138	+		MIT1002_01300	0.67	-2.0
1,445,148	+		MIT1002_01300	0.68	-2.6
1,445,207	+		MIT1002_01300	0.73	+0.1
1,445,241	+		MIT1002_01300	0.76	-2.5
1,445,249	-		MIT1002_01300	0.76	-3.2
1,445,249	-		MIT1002_01300	0.76	+0.3