Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01278

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
1,408,666	-				-1.9
1,408,722	-				+1.7
1,408,744	-				-1.5
1,408,760	+				-0.8
1,408,770	-				+2.1
1,408,846	-				-0.7
1,408,860	-				+0.8
1,408,938	+				+0.8
1,408,947	+				+0.9
1,408,955	-				+0.3
1,408,969	+				+0.1
1,409,074	+		MIT1002_01277	0.16	-0.8
1,409,074	+		MIT1002_01277	0.16	-1.3
1,409,082	-		MIT1002_01277	0.17	-0.5
1,409,082	-		MIT1002_01277	0.17	-1.0
1,409,082	-		MIT1002_01277	0.17	-3.7
1,409,082	-		MIT1002_01277	0.17	+0.4
1,409,082	-		MIT1002_01277	0.17	+0.7
1,409,082	-		MIT1002_01277	0.17	-0.6
1,409,102	-		MIT1002_01277	0.20	-0.1
1,409,112	-		MIT1002_01277	0.22	+0.9
1,409,184	-		MIT1002_01277	0.32	-1.0
1,409,184	-		MIT1002_01277	0.32	-2.1
1,409,184	-		MIT1002_01277	0.32	-3.5
1,409,275	+		MIT1002_01277	0.45	-3.2
1,409,363	+		MIT1002_01277	0.57	-0.8
1,409,726	+		MIT1002_01278	0.12	+0.5
1,409,816	+		MIT1002_01278	0.28	-0.4
1,409,817	-		MIT1002_01278	0.29	-0.9
1,409,818	+		MIT1002_01278	0.29	-0.7
1,409,818	+		MIT1002_01278	0.29	-2.1
1,409,818	-		MIT1002_01278	0.29	-3.2
1,409,827	+		MIT1002_01278	0.30	+3.7
1,409,835	-		MIT1002_01278	0.32	-1.2
1,409,835	-		MIT1002_01278	0.32	+0.6
1,409,843	+		MIT1002_01278	0.33	+0.6
1,409,878	+		MIT1002_01278	0.40	+0.3
1,409,931	-		MIT1002_01278	0.49	-1.0
1,409,933	+		MIT1002_01278	0.49	+0.1
1,409,933	+		MIT1002_01278	0.49	+0.8
1,409,939	-		MIT1002_01278	0.51	+0.2
1,409,939	-		MIT1002_01278	0.51	+0.3
1,409,997	-		MIT1002_01278	0.61	-0.4
1,410,022	+		MIT1002_01278	0.65	-0.2
1,410,077	+		MIT1002_01278	0.75	+0.2
1,410,077	+		MIT1002_01278	0.75	-1.5
1,410,085	-		MIT1002_01278	0.77	-0.3
1,410,085	-		MIT1002_01278	0.77	-0.3
1,410,108	+		MIT1002_01278	0.81	-0.7
1,410,121	+		MIT1002_01278	0.83	-0.6
1,410,179	+				-2.0
1,410,182	-				+0.3
1,410,187	-				-0.2
1,410,187	-				-0.5
1,410,187	-				-0.0
1,410,315	-				-0.3
1,410,321	-				-0.4
1,410,395	+				-2.4
1,410,398	-				-1.0
1,410,403	+				+0.2
1,410,411	-				+1.6
1,410,411	-				-0.4
1,410,467	+				+1.5
1,410,506	+				-2.6
1,410,506	+				-2.2
1,410,507	-				-0.9
1,410,507	-				+0.7
1,410,640	+		MIT1002_01279	0.17	-0.0
1,410,752	+		MIT1002_01279	0.23	+0.5
1,410,752	-		MIT1002_01279	0.23	-0.7
1,410,780	-		MIT1002_01279	0.24	+0.1
1,410,847	-		MIT1002_01279	0.28	-0.8
1,410,898	-		MIT1002_01279	0.31	+1.2
1,410,899	+		MIT1002_01279	0.31	-2.0
1,410,907	-		MIT1002_01279	0.31	+0.4
1,410,914	-		MIT1002_01279	0.31	+0.5
1,410,924	-		MIT1002_01279	0.32	+0.0
1,410,939	+		MIT1002_01279	0.33	-1.4
1,410,945	-		MIT1002_01279	0.33	-0.1
1,410,989	+		MIT1002_01279	0.35	+1.3
1,410,997	-		MIT1002_01279	0.36	+0.0
1,411,038	+		MIT1002_01279	0.38	-0.0
1,411,088	+		MIT1002_01279	0.41	-1.2
1,411,098	-		MIT1002_01279	0.41	+1.5
1,411,120	-		MIT1002_01279	0.43	+0.4
1,411,159	+		MIT1002_01279	0.45	+0.8
1,411,159	+		MIT1002_01279	0.45	+1.0