Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00947

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
1,048,263	-				+1.1
1,048,344	+				+0.3
1,048,363	-				-0.7
1,048,406	+				+1.1
1,048,505	+				-0.7
1,048,514	-				-0.7
1,048,528	+				-0.9
1,048,546	+				+0.9
1,048,549	+				+0.1
1,048,557	-				+0.1
1,048,585	+				+0.3
1,048,646	+				-6.3
1,048,654	-				-2.4
1,048,667	+		MIT1002_00946	0.12	-3.3
1,048,683	-		MIT1002_00946	0.14	-4.1
1,048,683	-		MIT1002_00946	0.14	-3.0
1,048,729	-		MIT1002_00946	0.22	-7.1
1,048,794	-		MIT1002_00946	0.33	-6.3
1,048,850	+		MIT1002_00946	0.42	-5.4
1,048,995	+		MIT1002_00946	0.66	-2.3
1,048,998	-		MIT1002_00946	0.66	-6.0
1,049,002	+		MIT1002_00946	0.67	-3.8
1,049,002	+		MIT1002_00946	0.67	-4.6
1,049,002	+		MIT1002_00946	0.67	-1.3
1,049,010	-		MIT1002_00946	0.68	-5.2
1,049,010	-		MIT1002_00946	0.68	-4.0
1,049,010	-		MIT1002_00946	0.68	-3.7
1,049,010	-		MIT1002_00946	0.68	-2.0
1,049,164	+				-0.8
1,049,172	+				-1.3
1,049,175	-				-2.6
1,049,178	-				-1.9
1,049,264	+				-4.2
1,049,274	+				-5.4
1,049,298	+				-5.3
1,049,341	-				-6.1
1,049,609	+		MIT1002_00947	0.29	-4.9
1,049,653	-		MIT1002_00947	0.32	-3.0
1,049,653	-		MIT1002_00947	0.32	-3.5
1,049,689	+		MIT1002_00947	0.35	-3.1
1,049,706	+		MIT1002_00947	0.36	-5.6
1,049,723	+		MIT1002_00947	0.37	-2.6
1,049,726	-		MIT1002_00947	0.37	-3.2
1,049,729	+		MIT1002_00947	0.37	-5.8
1,049,731	-		MIT1002_00947	0.38	-5.5
1,049,731	-		MIT1002_00947	0.38	-5.0
1,049,740	+		MIT1002_00947	0.38	-3.5
1,049,752	+		MIT1002_00947	0.39	-5.2
1,049,812	-		MIT1002_00947	0.43	-3.7
1,049,847	+		MIT1002_00947	0.46	-3.1
1,049,847	+		MIT1002_00947	0.46	-2.6
1,049,861	-		MIT1002_00947	0.47	-1.0
1,049,874	+		MIT1002_00947	0.48	-3.9
1,049,874	+		MIT1002_00947	0.48	-0.7
1,049,875	+		MIT1002_00947	0.48	-1.5
1,049,884	-		MIT1002_00947	0.48	-4.4
1,049,884	-		MIT1002_00947	0.48	-5.9
1,049,884	-		MIT1002_00947	0.48	-5.9
1,049,956	+		MIT1002_00947	0.54	-4.7
1,049,962	-		MIT1002_00947	0.54	-4.0
1,049,988	+		MIT1002_00947	0.56	-4.1
1,049,988	+		MIT1002_00947	0.56	-4.5
1,050,022	+		MIT1002_00947	0.58	-3.3
1,050,134	-		MIT1002_00947	0.66	-2.8
1,050,155	-		MIT1002_00947	0.68	-5.4
1,050,161	+		MIT1002_00947	0.68	-3.1
1,050,161	+		MIT1002_00947	0.68	-3.9
1,050,163	+		MIT1002_00947	0.68	-6.8
1,050,169	-		MIT1002_00947	0.69	-3.9
1,050,179	-		MIT1002_00947	0.70	-3.0
1,050,217	+		MIT1002_00947	0.72	-3.3
1,050,217	+		MIT1002_00947	0.72	-3.6
1,050,217	+		MIT1002_00947	0.72	-2.0
1,050,222	-		MIT1002_00947	0.73	-2.3
1,050,225	-		MIT1002_00947	0.73	-4.5
1,050,227	-		MIT1002_00947	0.73	-5.5
1,050,240	+		MIT1002_00947	0.74	-3.6
1,050,299	-		MIT1002_00947	0.78	-2.5
1,050,388	-		MIT1002_00947	0.84	-5.3
1,050,458	+		MIT1002_00947	0.89	-6.3
1,050,537	-				-2.5
1,050,541	-				-4.3
1,050,594	+				-4.7
1,050,627	+				-4.6
1,050,664	-				-3.4
1,050,730	-		MIT1002_00948	0.10	-5.7
1,050,781	+		MIT1002_00948	0.15	-2.5
1,050,791	+		MIT1002_00948	0.16	-4.5
1,050,837	-		MIT1002_00948	0.20	-5.1
1,050,837	-		MIT1002_00948	0.20	-2.3
1,050,881	+		MIT1002_00948	0.24	-4.0
1,050,881	+		MIT1002_00948	0.24	-1.3
1,050,889	-		MIT1002_00948	0.25	-2.6
1,050,974	+		MIT1002_00948	0.33	-8.7
1,050,974	+		MIT1002_00948	0.33	-4.8
1,050,986	+		MIT1002_00948	0.34	-5.6
1,050,991	+		MIT1002_00948	0.34	-2.9
1,050,999	-		MIT1002_00948	0.35	-5.4
1,051,001	+		MIT1002_00948	0.35	-5.8
1,051,004	-		MIT1002_00948	0.35	-3.4
1,051,017	+		MIT1002_00948	0.37	-4.3
1,051,039	+		MIT1002_00948	0.39	-2.6
1,051,039	+		MIT1002_00948	0.39	-5.1
1,051,055	+		MIT1002_00948	0.40	-1.9
1,051,129	+		MIT1002_00948	0.47	-3.9
1,051,161	+		MIT1002_00948	0.50	-2.9
1,051,161	+		MIT1002_00948	0.50	-6.2
1,051,171	+		MIT1002_00948	0.51	-5.5
1,051,179	-		MIT1002_00948	0.51	-6.2
1,051,239	+		MIT1002_00948	0.57	-4.0
1,051,380	-		MIT1002_00948	0.70	-5.2
1,051,404	-		MIT1002_00948	0.72	-2.4
1,051,404	-		MIT1002_00948	0.72	-5.6
1,051,406	+		MIT1002_00948	0.72	-2.8
1,051,425	+		MIT1002_00948	0.74	-1.7
1,051,449	-		MIT1002_00948	0.76	-2.8
1,051,450	-		MIT1002_00948	0.76	-2.3
1,051,478	-		MIT1002_00948	0.79	-4.9
1,051,483	-		MIT1002_00948	0.79	-5.5
1,051,492	-		MIT1002_00948	0.80	-3.9
1,051,522	+		MIT1002_00948	0.83	-4.5
1,051,524	+		MIT1002_00948	0.83	-2.7
1,051,542	+		MIT1002_00948	0.84	-2.3
1,051,598	+		MIT1002_00948	0.90	-5.4