Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00916

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
1,013,741	+		MIT1002_00915	0.24	-0.8
1,013,741	+		MIT1002_00915	0.24	-2.0
1,013,765	+		MIT1002_00915	0.27	+0.7
1,013,768	-		MIT1002_00915	0.27	-0.2
1,013,773	-		MIT1002_00915	0.27	-1.4
1,013,788	-		MIT1002_00915	0.29	+1.5
1,013,835	+		MIT1002_00915	0.33	-0.4
1,013,844	-		MIT1002_00915	0.34	+1.9
1,013,925	+		MIT1002_00915	0.41	+2.0
1,013,925	+		MIT1002_00915	0.41	+0.2
1,013,925	+		MIT1002_00915	0.41	-1.2
1,013,933	-		MIT1002_00915	0.42	+0.6
1,013,933	-		MIT1002_00915	0.42	+1.2
1,013,933	-		MIT1002_00915	0.42	-0.2
1,013,972	-		MIT1002_00915	0.45	+0.3
1,014,031	-		MIT1002_00915	0.51	-1.1
1,014,160	+		MIT1002_00915	0.62	-0.3
1,014,198	+		MIT1002_00915	0.66	-0.2
1,014,199	+		MIT1002_00915	0.66	-0.2
1,014,199	+		MIT1002_00915	0.66	+0.6
1,014,199	+		MIT1002_00915	0.66	+0.7
1,014,207	-		MIT1002_00915	0.67	+1.3
1,014,207	-		MIT1002_00915	0.67	-0.0
1,014,207	-		MIT1002_00915	0.67	+0.7
1,014,207	-		MIT1002_00915	0.67	+0.5
1,014,228	+		MIT1002_00915	0.69	-0.8
1,014,228	-		MIT1002_00915	0.69	-0.6
1,014,257	+		MIT1002_00915	0.71	-2.3
1,014,265	-		MIT1002_00915	0.72	-1.4
1,014,265	-		MIT1002_00915	0.72	+2.1
1,014,290	-		MIT1002_00915	0.74	+1.2
1,014,394	+		MIT1002_00915	0.84	+0.9
1,014,410	-		MIT1002_00915	0.85	+1.1
1,014,410	-		MIT1002_00915	0.85	+1.1
1,014,410	-		MIT1002_00915	0.85	-0.4
1,014,427	+		MIT1002_00915	0.87	+0.2
1,014,510	+				-1.7
1,014,518	-				+1.7
1,014,528	+				-0.5
1,014,570	+				+1.7
1,014,590	-				-0.6
1,014,621	-				+0.3
1,014,645	-				-0.7
1,014,646	+				-0.6
1,014,646	-				-0.5
1,014,656	+				+1.0
1,014,663	+				+0.8
1,014,663	+				-0.8
1,014,671	+				-0.2
1,014,744	+		MIT1002_00916	0.15	+1.4
1,014,762	+		MIT1002_00916	0.18	-1.4
1,014,866	-		MIT1002_00916	0.36	+1.9
1,014,987	-		MIT1002_00916	0.57	+1.4
1,014,993	+		MIT1002_00916	0.58	-1.5
1,015,032	-		MIT1002_00916	0.65	+0.0
1,015,034	+		MIT1002_00916	0.65	+0.8
1,015,166	-		MIT1002_00916	0.88	-2.6
1,015,220	-				+1.5
1,015,225	-				+0.3
1,015,349	+		MIT1002_00917	0.18	-0.4
1,015,392	-		MIT1002_00917	0.32	+0.9
1,015,440	-		MIT1002_00917	0.47	-0.3
1,015,538	+		MIT1002_00917	0.78	-0.0
1,015,573	+		MIT1002_00917	0.90	-0.2
1,015,573	+		MIT1002_00917	0.90	+0.8
1,015,585	+				+2.3
1,015,585	+				+0.5
1,015,593	-				+0.1
1,015,697	+				-2.4
1,015,717	+				+1.4
1,015,717	+				+0.1
1,015,826	+				+0.2
1,015,901	+				+1.1
1,015,901	+				-0.7
1,015,950	-		MIT1002_00918	0.12	+1.4
1,015,962	-		MIT1002_00918	0.12	-0.4
1,015,966	+		MIT1002_00918	0.12	+2.0
1,015,966	+		MIT1002_00918	0.12	+0.9
1,016,024	+		MIT1002_00918	0.15	+0.4
1,016,042	+		MIT1002_00918	0.16	-0.6
1,016,042	+		MIT1002_00918	0.16	+1.3
1,016,050	-		MIT1002_00918	0.16	+0.4
1,016,057	-		MIT1002_00918	0.16	+1.1
1,016,067	+		MIT1002_00918	0.17	-0.3
1,016,174	-		MIT1002_00918	0.21	+0.0