Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00814

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 2
899,115	-				-1.7
899,134	-				+0.3
899,153	+				-0.1
899,153	+				+1.1
899,207	+				+2.7
899,232	-				-1.7
899,344	-				-2.0
899,388	-				-3.8
899,403	-				-1.7
899,415	+				-2.0
899,425	+				-2.7
899,484	+				-1.7
899,539	+		MIT1002_00814	0.12	-1.7
899,662	-		MIT1002_00814	0.31	-0.6
899,684	-		MIT1002_00814	0.35	-1.4
899,715	-		MIT1002_00814	0.39	-0.7
899,773	-		MIT1002_00814	0.49	-0.7
899,791	+		MIT1002_00814	0.52	-4.2
899,872	-		MIT1002_00814	0.64	+0.1
899,879	+		MIT1002_00814	0.65	-1.5
899,887	-		MIT1002_00814	0.67	-3.4
899,889	+		MIT1002_00814	0.67	-1.0
899,892	+		MIT1002_00814	0.67	-2.0
899,986	+		MIT1002_00814	0.82	-2.5
900,075	+				-0.5
900,083	-				-1.0
900,134	-				-1.7
900,139	-				-3.0
900,523	-		MIT1002_00815	0.33	-1.8
900,932	-		MIT1002_00815	0.66	-3.0