Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS38580 and QEN71_RS38585 are separated by 54 nucleotides QEN71_RS38585 and QEN71_RS38590 are separated by 27 nucleotides
QEN71_RS38580: QEN71_RS38580 - alpha/beta hydrolase, at 2,038,936 to 2,039,964
_RS38580
QEN71_RS38585: QEN71_RS38585 - haloacid dehalogenase type II, at 2,040,019 to 2,040,741
_RS38585
QEN71_RS38590: QEN71_RS38590 - L-fuconate dehydratase, at 2,040,769 to 2,042,067
_RS38590
Position (kb)
2040
2041 Strain fitness (log2 ratio)
-2
-1
0
1 at 2039.088 kb on + strand, within QEN71_RS38580 at 2039.411 kb on - strand, within QEN71_RS38580 at 2039.617 kb on + strand, within QEN71_RS38580 at 2039.618 kb on - strand, within QEN71_RS38580 at 2039.618 kb on - strand, within QEN71_RS38580 at 2039.705 kb on - strand, within QEN71_RS38580 at 2039.806 kb on + strand, within QEN71_RS38580 at 2039.807 kb on - strand, within QEN71_RS38580 at 2039.855 kb on - strand, within QEN71_RS38580 at 2039.855 kb on - strand, within QEN71_RS38580 at 2039.962 kb on + strand at 2039.962 kb on + strand at 2040.133 kb on - strand, within QEN71_RS38585 at 2040.180 kb on + strand, within QEN71_RS38585 at 2040.243 kb on - strand, within QEN71_RS38585 at 2040.264 kb on - strand, within QEN71_RS38585 at 2040.264 kb on - strand, within QEN71_RS38585 at 2040.264 kb on - strand, within QEN71_RS38585 at 2040.723 kb on + strand at 2040.756 kb on + strand at 2040.837 kb on + strand at 2040.838 kb on - strand at 2040.861 kb on + strand at 2040.862 kb on - strand at 2040.863 kb on + strand at 2040.920 kb on + strand, within QEN71_RS38590 at 2040.960 kb on + strand, within QEN71_RS38590 at 2040.961 kb on - strand, within QEN71_RS38590 at 2040.961 kb on - strand, within QEN71_RS38590 at 2040.961 kb on - strand, within QEN71_RS38590 at 2040.962 kb on + strand, within QEN71_RS38590 at 2040.963 kb on - strand, within QEN71_RS38590 at 2040.963 kb on - strand, within QEN71_RS38590 at 2040.989 kb on + strand, within QEN71_RS38590 at 2041.133 kb on - strand, within QEN71_RS38590 at 2041.133 kb on - strand, within QEN71_RS38590 at 2041.224 kb on + strand, within QEN71_RS38590 at 2041.505 kb on + strand, within QEN71_RS38590 at 2041.505 kb on + strand, within QEN71_RS38590 at 2041.506 kb on - strand, within QEN71_RS38590 at 2041.590 kb on - strand, within QEN71_RS38590 at 2041.653 kb on + strand, within QEN71_RS38590 at 2041.653 kb on + strand, within QEN71_RS38590 at 2041.654 kb on - strand, within QEN71_RS38590
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,039,088 + QEN71_RS38580 0.15 -0.5 2,039,411 - QEN71_RS38580 0.46 +0.9 2,039,617 + QEN71_RS38580 0.66 +0.3 2,039,618 - QEN71_RS38580 0.66 -1.8 2,039,618 - QEN71_RS38580 0.66 -0.4 2,039,705 - QEN71_RS38580 0.75 -0.0 2,039,806 + QEN71_RS38580 0.85 -0.7 2,039,807 - QEN71_RS38580 0.85 -0.6 2,039,855 - QEN71_RS38580 0.89 -0.7 2,039,855 - QEN71_RS38580 0.89 -0.7 2,039,962 + +0.1 2,039,962 + +0.6 2,040,133 - QEN71_RS38585 0.16 +0.7 2,040,180 + QEN71_RS38585 0.22 +0.5 2,040,243 - QEN71_RS38585 0.31 +0.1 2,040,264 - QEN71_RS38585 0.34 +0.1 2,040,264 - QEN71_RS38585 0.34 -0.8 2,040,264 - QEN71_RS38585 0.34 -0.4 2,040,723 + -1.2 2,040,756 + +0.3 2,040,837 + +0.5 2,040,838 - +1.2 2,040,861 + +1.5 2,040,862 - +0.5 2,040,863 + -2.1 2,040,920 + QEN71_RS38590 0.12 -0.5 2,040,960 + QEN71_RS38590 0.15 +1.5 2,040,961 - QEN71_RS38590 0.15 -0.4 2,040,961 - QEN71_RS38590 0.15 -0.0 2,040,961 - QEN71_RS38590 0.15 +0.7 2,040,962 + QEN71_RS38590 0.15 +0.8 2,040,963 - QEN71_RS38590 0.15 +0.1 2,040,963 - QEN71_RS38590 0.15 -2.4 2,040,989 + QEN71_RS38590 0.17 +0.4 2,041,133 - QEN71_RS38590 0.28 -1.6 2,041,133 - QEN71_RS38590 0.28 -0.1 2,041,224 + QEN71_RS38590 0.35 -0.0 2,041,505 + QEN71_RS38590 0.57 -0.9 2,041,505 + QEN71_RS38590 0.57 +0.2 2,041,506 - QEN71_RS38590 0.57 +0.6 2,041,590 - QEN71_RS38590 0.63 +0.7 2,041,653 + QEN71_RS38590 0.68 -0.1 2,041,653 + QEN71_RS38590 0.68 +1.6 2,041,654 - QEN71_RS38590 0.68 +0.1
Or see this region's nucleotide sequence