Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS21950

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS21940 and QEN71_RS21945 overlap by 2 nucleotidesQEN71_RS21945 and QEN71_RS21950 are separated by 142 nucleotidesQEN71_RS21950 and QEN71_RS21955 are separated by 104 nucleotides QEN71_RS21940: QEN71_RS21940 - ABC transporter ATP-binding protein, at 4,869,576 to 4,870,262 _RS21940 QEN71_RS21945: QEN71_RS21945 - arylesterase, at 4,870,261 to 4,870,980 _RS21945 QEN71_RS21950: QEN71_RS21950 - hypothetical protein, at 4,871,123 to 4,871,464 _RS21950 QEN71_RS21955: QEN71_RS21955 - SurA N-terminal domain-containing protein, at 4,871,569 to 4,873,497 _RS21955 Position (kb) 4871 4872Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4870.208 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.272 kb on + strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.273 kb on - strandat 4870.334 kb on + strand, within QEN71_RS21945at 4870.334 kb on + strand, within QEN71_RS21945at 4870.335 kb on - strand, within QEN71_RS21945at 4870.335 kb on - strand, within QEN71_RS21945at 4870.335 kb on - strand, within QEN71_RS21945at 4870.335 kb on - strand, within QEN71_RS21945at 4870.335 kb on - strand, within QEN71_RS21945at 4870.436 kb on + strand, within QEN71_RS21945at 4870.463 kb on - strand, within QEN71_RS21945at 4870.531 kb on + strand, within QEN71_RS21945at 4870.531 kb on + strand, within QEN71_RS21945at 4870.532 kb on - strand, within QEN71_RS21945at 4870.532 kb on - strand, within QEN71_RS21945at 4870.532 kb on - strand, within QEN71_RS21945at 4870.532 kb on - strand, within QEN71_RS21945at 4870.532 kb on - strand, within QEN71_RS21945at 4870.532 kb on - strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.533 kb on + strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.534 kb on - strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.750 kb on + strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.751 kb on - strand, within QEN71_RS21945at 4870.765 kb on + strand, within QEN71_RS21945at 4870.765 kb on + strand, within QEN71_RS21945at 4870.765 kb on + strand, within QEN71_RS21945at 4870.765 kb on + strand, within QEN71_RS21945at 4870.765 kb on + strand, within QEN71_RS21945at 4870.766 kb on - strand, within QEN71_RS21945at 4870.766 kb on - strand, within QEN71_RS21945at 4870.766 kb on - strand, within QEN71_RS21945at 4870.777 kb on + strand, within QEN71_RS21945at 4870.777 kb on + strand, within QEN71_RS21945at 4870.777 kb on + strand, within QEN71_RS21945at 4870.778 kb on - strand, within QEN71_RS21945at 4870.823 kb on + strand, within QEN71_RS21945at 4870.823 kb on + strand, within QEN71_RS21945at 4870.823 kb on + strand, within QEN71_RS21945at 4870.823 kb on + strand, within QEN71_RS21945at 4870.823 kb on + strand, within QEN71_RS21945at 4870.824 kb on - strand, within QEN71_RS21945at 4870.824 kb on - strand, within QEN71_RS21945at 4870.824 kb on - strand, within QEN71_RS21945at 4870.824 kb on - strand, within QEN71_RS21945at 4870.824 kb on - strand, within QEN71_RS21945at 4870.824 kb on - strand, within QEN71_RS21945at 4870.875 kb on + strand, within QEN71_RS21945at 4870.875 kb on + strand, within QEN71_RS21945at 4870.876 kb on - strand, within QEN71_RS21945at 4870.876 kb on - strand, within QEN71_RS21945at 4870.876 kb on - strand, within QEN71_RS21945at 4870.876 kb on - strand, within QEN71_RS21945at 4870.925 kb on + strandat 4870.925 kb on + strandat 4870.926 kb on - strandat 4870.926 kb on - strandat 4871.013 kb on + strandat 4871.031 kb on + strandat 4871.094 kb on + strandat 4871.094 kb on + strandat 4871.094 kb on + strandat 4871.094 kb on + strandat 4871.095 kb on - strandat 4871.095 kb on - strandat 4871.119 kb on + strandat 4871.120 kb on - strandat 4871.129 kb on + strandat 4871.129 kb on + strandat 4871.129 kb on + strandat 4871.130 kb on - strandat 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.324 kb on + strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.325 kb on - strand, within QEN71_RS21950at 4871.378 kb on + strand, within QEN71_RS21950at 4871.378 kb on + strand, within QEN71_RS21950at 4871.462 kb on + strandat 4871.570 kb on + strandat 4871.570 kb on + strandat 4871.570 kb on + strandat 4871.571 kb on - strandat 4871.571 kb on - strandat 4871.571 kb on - strandat 4871.571 kb on - strandat 4871.571 kb on - strandat 4871.603 kb on + strandat 4871.603 kb on + strandat 4871.603 kb on + strandat 4871.603 kb on + strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.604 kb on - strandat 4871.643 kb on - strandat 4871.643 kb on - strandat 4871.643 kb on - strandat 4871.757 kb on - strandat 4871.757 kb on - strandat 4871.786 kb on + strand, within QEN71_RS21955at 4871.787 kb on - strand, within QEN71_RS21955at 4871.787 kb on - strand, within QEN71_RS21955at 4871.787 kb on - strand, within QEN71_RS21955at 4871.816 kb on + strand, within QEN71_RS21955at 4871.817 kb on - strand, within QEN71_RS21955at 4871.817 kb on - strand, within QEN71_RS21955at 4871.817 kb on - strand, within QEN71_RS21955at 4871.817 kb on - strand, within QEN71_RS21955at 4872.029 kb on + strand, within QEN71_RS21955at 4872.030 kb on - strand, within QEN71_RS21955at 4872.030 kb on - strand, within QEN71_RS21955at 4872.038 kb on - strand, within QEN71_RS21955at 4872.038 kb on - strand, within QEN71_RS21955at 4872.038 kb on - strand, within QEN71_RS21955at 4872.215 kb on + strand, within QEN71_RS21955at 4872.215 kb on + strand, within QEN71_RS21955at 4872.215 kb on + strand, within QEN71_RS21955at 4872.216 kb on - strand, within QEN71_RS21955at 4872.216 kb on - strand, within QEN71_RS21955at 4872.216 kb on - strand, within QEN71_RS21955at 4872.216 kb on - strand, within QEN71_RS21955at 4872.216 kb on - strand, within QEN71_RS21955at 4872.216 kb on - strand, within QEN71_RS21955at 4872.254 kb on + strand, within QEN71_RS21955at 4872.254 kb on + strand, within QEN71_RS21955at 4872.254 kb on + strand, within QEN71_RS21955

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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4,870,208 + +1.9
4,870,272 + -1.8
4,870,272 + -1.5
4,870,272 + +0.7
4,870,272 + +0.2
4,870,272 + -1.3
4,870,272 + -0.1
4,870,272 + +0.3
4,870,272 + -0.2
4,870,272 + -0.4
4,870,272 + -0.1
4,870,273 - +0.0
4,870,273 - +0.2
4,870,273 - -0.1
4,870,273 - +0.5
4,870,273 - -0.3
4,870,273 - +0.1
4,870,273 - +0.1
4,870,273 - +0.3
4,870,273 - +0.1
4,870,334 + QEN71_RS21945 0.10 -0.3
4,870,334 + QEN71_RS21945 0.10 +1.8
4,870,335 - QEN71_RS21945 0.10 -0.9
4,870,335 - QEN71_RS21945 0.10 +0.0
4,870,335 - QEN71_RS21945 0.10 -1.2
4,870,335 - QEN71_RS21945 0.10 +0.4
4,870,335 - QEN71_RS21945 0.10 -0.4
4,870,436 + QEN71_RS21945 0.24 +0.8
4,870,463 - QEN71_RS21945 0.28 -0.7
4,870,531 + QEN71_RS21945 0.38 -1.3
4,870,531 + QEN71_RS21945 0.38 +0.3
4,870,532 - QEN71_RS21945 0.38 -1.1
4,870,532 - QEN71_RS21945 0.38 +0.8
4,870,532 - QEN71_RS21945 0.38 -0.9
4,870,532 - QEN71_RS21945 0.38 +0.8
4,870,532 - QEN71_RS21945 0.38 -0.1
4,870,532 - QEN71_RS21945 0.38 +0.2
4,870,533 + QEN71_RS21945 0.38 -0.5
4,870,533 + QEN71_RS21945 0.38 -0.0
4,870,533 + QEN71_RS21945 0.38 -2.4
4,870,533 + QEN71_RS21945 0.38 +0.1
4,870,533 + QEN71_RS21945 0.38 +0.4
4,870,533 + QEN71_RS21945 0.38 -1.4
4,870,533 + QEN71_RS21945 0.38 -2.5
4,870,534 - QEN71_RS21945 0.38 +0.1
4,870,534 - QEN71_RS21945 0.38 -0.4
4,870,534 - QEN71_RS21945 0.38 +0.5
4,870,534 - QEN71_RS21945 0.38 -2.5
4,870,534 - QEN71_RS21945 0.38 -0.9
4,870,534 - QEN71_RS21945 0.38 +0.3
4,870,534 - QEN71_RS21945 0.38 -0.2
4,870,534 - QEN71_RS21945 0.38 -0.5
4,870,534 - QEN71_RS21945 0.38 +0.3
4,870,534 - QEN71_RS21945 0.38 +0.8
4,870,750 + QEN71_RS21945 0.68 +0.8
4,870,750 + QEN71_RS21945 0.68 +1.2
4,870,750 + QEN71_RS21945 0.68 +0.4
4,870,750 + QEN71_RS21945 0.68 +1.3
4,870,750 + QEN71_RS21945 0.68 -1.2
4,870,750 + QEN71_RS21945 0.68 -0.3
4,870,750 + QEN71_RS21945 0.68 -0.3
4,870,750 + QEN71_RS21945 0.68 -0.1
4,870,750 + QEN71_RS21945 0.68 -1.2
4,870,750 + QEN71_RS21945 0.68 -0.1
4,870,750 + QEN71_RS21945 0.68 +0.7
4,870,750 + QEN71_RS21945 0.68 +0.9
4,870,750 + QEN71_RS21945 0.68 +0.0
4,870,750 + QEN71_RS21945 0.68 -0.4
4,870,750 + QEN71_RS21945 0.68 +1.3
4,870,751 - QEN71_RS21945 0.68 +0.3
4,870,751 - QEN71_RS21945 0.68 -0.4
4,870,751 - QEN71_RS21945 0.68 +0.1
4,870,751 - QEN71_RS21945 0.68 -0.3
4,870,751 - QEN71_RS21945 0.68 -1.1
4,870,751 - QEN71_RS21945 0.68 -0.4
4,870,751 - QEN71_RS21945 0.68 -0.1
4,870,751 - QEN71_RS21945 0.68 +1.9
4,870,751 - QEN71_RS21945 0.68 +2.3
4,870,751 - QEN71_RS21945 0.68 -0.7
4,870,751 - QEN71_RS21945 0.68 -0.0
4,870,765 + QEN71_RS21945 0.70 +0.9
4,870,765 + QEN71_RS21945 0.70 +0.5
4,870,765 + QEN71_RS21945 0.70 +1.3
4,870,765 + QEN71_RS21945 0.70 -0.7
4,870,765 + QEN71_RS21945 0.70 -1.1
4,870,766 - QEN71_RS21945 0.70 -1.5
4,870,766 - QEN71_RS21945 0.70 +0.6
4,870,766 - QEN71_RS21945 0.70 +0.6
4,870,777 + QEN71_RS21945 0.72 -1.3
4,870,777 + QEN71_RS21945 0.72 -1.2
4,870,777 + QEN71_RS21945 0.72 -0.2
4,870,778 - QEN71_RS21945 0.72 -0.9
4,870,823 + QEN71_RS21945 0.78 +0.9
4,870,823 + QEN71_RS21945 0.78 +0.3
4,870,823 + QEN71_RS21945 0.78 -1.9
4,870,823 + QEN71_RS21945 0.78 -0.9
4,870,823 + QEN71_RS21945 0.78 +0.5
4,870,824 - QEN71_RS21945 0.78 -1.6
4,870,824 - QEN71_RS21945 0.78 -1.0
4,870,824 - QEN71_RS21945 0.78 -1.2
4,870,824 - QEN71_RS21945 0.78 +0.9
4,870,824 - QEN71_RS21945 0.78 -1.4
4,870,824 - QEN71_RS21945 0.78 +0.3
4,870,875 + QEN71_RS21945 0.85 -1.7
4,870,875 + QEN71_RS21945 0.85 +0.7
4,870,876 - QEN71_RS21945 0.85 +1.1
4,870,876 - QEN71_RS21945 0.85 -1.4
4,870,876 - QEN71_RS21945 0.85 +0.3
4,870,876 - QEN71_RS21945 0.85 -0.4
4,870,925 + -0.4
4,870,925 + +0.2
4,870,926 - -0.7
4,870,926 - -0.1
4,871,013 + +1.6
4,871,031 + +1.6
4,871,094 + +0.7
4,871,094 + -2.6
4,871,094 + -0.5
4,871,094 + -0.3
4,871,095 - +0.1
4,871,095 - +1.7
4,871,119 + +0.6
4,871,120 - -2.1
4,871,129 + -0.4
4,871,129 + -0.9
4,871,129 + +1.1
4,871,130 - -0.1
4,871,324 + QEN71_RS21950 0.59 +0.2
4,871,324 + QEN71_RS21950 0.59 +0.4
4,871,324 + QEN71_RS21950 0.59 -0.6
4,871,324 + QEN71_RS21950 0.59 -0.7
4,871,324 + QEN71_RS21950 0.59 +0.9
4,871,324 + QEN71_RS21950 0.59 -0.3
4,871,324 + QEN71_RS21950 0.59 -0.4
4,871,324 + QEN71_RS21950 0.59 +0.0
4,871,324 + QEN71_RS21950 0.59 -0.0
4,871,324 + QEN71_RS21950 0.59 -1.0
4,871,324 + QEN71_RS21950 0.59 -0.5
4,871,324 + QEN71_RS21950 0.59 +0.0
4,871,324 + QEN71_RS21950 0.59 -1.4
4,871,324 + QEN71_RS21950 0.59 -1.6
4,871,324 + QEN71_RS21950 0.59 +0.1
4,871,324 + QEN71_RS21950 0.59 -1.2
4,871,324 + QEN71_RS21950 0.59 +1.4
4,871,325 - QEN71_RS21950 0.59 +0.5
4,871,325 - QEN71_RS21950 0.59 +0.2
4,871,325 - QEN71_RS21950 0.59 -0.2
4,871,325 - QEN71_RS21950 0.59 -0.7
4,871,325 - QEN71_RS21950 0.59 +0.4
4,871,325 - QEN71_RS21950 0.59 +0.1
4,871,325 - QEN71_RS21950 0.59 +0.0
4,871,325 - QEN71_RS21950 0.59 -1.5
4,871,325 - QEN71_RS21950 0.59 +0.1
4,871,378 + QEN71_RS21950 0.75 -0.2
4,871,378 + QEN71_RS21950 0.75 +0.4
4,871,462 + -0.1
4,871,570 + -0.1
4,871,570 + -0.1
4,871,570 + +0.1
4,871,571 - +1.7
4,871,571 - +0.8
4,871,571 - -0.2
4,871,571 - -0.2
4,871,571 - -0.2
4,871,603 + -0.7
4,871,603 + -0.9
4,871,603 + +1.1
4,871,603 + +0.4
4,871,604 - +1.1
4,871,604 - -0.1
4,871,604 - +0.5
4,871,604 - +0.1
4,871,604 - -0.7
4,871,604 - -0.3
4,871,604 - +0.1
4,871,604 - +0.7
4,871,604 - -0.7
4,871,643 - +1.3
4,871,643 - -0.1
4,871,643 - +0.6
4,871,757 - +0.4
4,871,757 - +0.7
4,871,786 + QEN71_RS21955 0.11 -0.7
4,871,787 - QEN71_RS21955 0.11 +0.5
4,871,787 - QEN71_RS21955 0.11 -0.8
4,871,787 - QEN71_RS21955 0.11 -0.1
4,871,816 + QEN71_RS21955 0.13 -2.5
4,871,817 - QEN71_RS21955 0.13 +1.9
4,871,817 - QEN71_RS21955 0.13 +2.3
4,871,817 - QEN71_RS21955 0.13 +0.2
4,871,817 - QEN71_RS21955 0.13 -2.1
4,872,029 + QEN71_RS21955 0.24 +1.0
4,872,030 - QEN71_RS21955 0.24 +0.5
4,872,030 - QEN71_RS21955 0.24 +0.5
4,872,038 - QEN71_RS21955 0.24 +0.9
4,872,038 - QEN71_RS21955 0.24 +1.1
4,872,038 - QEN71_RS21955 0.24 +0.8
4,872,215 + QEN71_RS21955 0.33 +1.3
4,872,215 + QEN71_RS21955 0.33 +0.6
4,872,215 + QEN71_RS21955 0.33 -0.9
4,872,216 - QEN71_RS21955 0.34 +1.9
4,872,216 - QEN71_RS21955 0.34 +0.1
4,872,216 - QEN71_RS21955 0.34 +0.4
4,872,216 - QEN71_RS21955 0.34 +0.9
4,872,216 - QEN71_RS21955 0.34 +2.0
4,872,216 - QEN71_RS21955 0.34 +1.1
4,872,254 + QEN71_RS21955 0.36 +3.4
4,872,254 + QEN71_RS21955 0.36 +2.5
4,872,254 + QEN71_RS21955 0.36 +1.5

Or see this region's nucleotide sequence