Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS21740

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS21735 and QEN71_RS21740 are separated by 79 nucleotidesQEN71_RS21740 and QEN71_RS21745 are separated by 203 nucleotidesQEN71_RS21745 and QEN71_RS21750 are separated by 188 nucleotides QEN71_RS21735: QEN71_RS21735 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 4,821,886 to 4,823,304 _RS21735 QEN71_RS21740: QEN71_RS21740 - undecaprenyl-phosphate glucose phosphotransferase, at 4,823,384 to 4,824,781 _RS21740 QEN71_RS21745: QEN71_RS21745 - hypothetical protein, at 4,824,985 to 4,825,206 _RS21745 QEN71_RS21750: QEN71_RS21750 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 4,825,395 to 4,826,942 _RS21750 Position (kb) 4823 4824 4825Strain fitness (log2 ratio) -2 -1 0 1at 4822.509 kb on - strand, within QEN71_RS21735at 4822.523 kb on + strand, within QEN71_RS21735at 4822.536 kb on - strand, within QEN71_RS21735at 4822.661 kb on + strand, within QEN71_RS21735at 4822.661 kb on + strand, within QEN71_RS21735at 4822.661 kb on + strand, within QEN71_RS21735at 4822.694 kb on + strand, within QEN71_RS21735at 4822.694 kb on + strand, within QEN71_RS21735at 4822.694 kb on + strand, within QEN71_RS21735at 4822.694 kb on + strand, within QEN71_RS21735at 4822.695 kb on - strand, within QEN71_RS21735at 4822.695 kb on - strand, within QEN71_RS21735at 4822.695 kb on - strand, within QEN71_RS21735at 4822.730 kb on + strand, within QEN71_RS21735at 4823.012 kb on + strand, within QEN71_RS21735at 4823.012 kb on + strand, within QEN71_RS21735at 4823.012 kb on + strand, within QEN71_RS21735at 4823.013 kb on - strand, within QEN71_RS21735at 4823.013 kb on - strand, within QEN71_RS21735at 4823.013 kb on - strand, within QEN71_RS21735at 4823.227 kb on + strandat 4823.228 kb on - strandat 4823.228 kb on - strandat 4823.228 kb on - strandat 4823.272 kb on + strandat 4823.272 kb on + strandat 4823.273 kb on - strandat 4823.273 kb on - strandat 4823.309 kb on + strandat 4823.309 kb on + strandat 4823.310 kb on - strandat 4823.363 kb on + strandat 4823.363 kb on + strandat 4823.364 kb on - strandat 4823.364 kb on - strandat 4823.364 kb on - strandat 4823.367 kb on + strandat 4823.367 kb on + strandat 4823.367 kb on + strandat 4823.368 kb on - strandat 4823.368 kb on - strandat 4823.368 kb on - strandat 4823.368 kb on - strandat 4823.469 kb on + strandat 4823.469 kb on + strandat 4823.469 kb on + strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.470 kb on - strandat 4823.473 kb on - strandat 4823.586 kb on + strand, within QEN71_RS21740at 4823.587 kb on - strand, within QEN71_RS21740at 4823.587 kb on - strand, within QEN71_RS21740at 4823.587 kb on - strand, within QEN71_RS21740at 4823.587 kb on - strand, within QEN71_RS21740at 4823.607 kb on + strand, within QEN71_RS21740at 4824.204 kb on + strand, within QEN71_RS21740at 4824.205 kb on - strand, within QEN71_RS21740at 4824.205 kb on - strand, within QEN71_RS21740at 4824.258 kb on + strand, within QEN71_RS21740at 4824.259 kb on - strand, within QEN71_RS21740at 4824.272 kb on - strand, within QEN71_RS21740at 4824.475 kb on - strand, within QEN71_RS21740at 4824.475 kb on - strand, within QEN71_RS21740at 4824.585 kb on + strand, within QEN71_RS21740at 4824.586 kb on - strand, within QEN71_RS21740at 4824.586 kb on - strand, within QEN71_RS21740at 4824.612 kb on + strand, within QEN71_RS21740at 4824.612 kb on + strand, within QEN71_RS21740at 4824.613 kb on - strand, within QEN71_RS21740at 4824.613 kb on - strand, within QEN71_RS21740at 4824.613 kb on - strand, within QEN71_RS21740at 4824.768 kb on - strandat 4824.950 kb on - strandat 4825.114 kb on + strand, within QEN71_RS21745at 4825.114 kb on + strand, within QEN71_RS21745at 4825.115 kb on - strand, within QEN71_RS21745at 4825.115 kb on - strand, within QEN71_RS21745at 4825.115 kb on - strand, within QEN71_RS21745at 4825.115 kb on - strand, within QEN71_RS21745at 4825.146 kb on + strand, within QEN71_RS21745at 4825.146 kb on + strand, within QEN71_RS21745at 4825.147 kb on - strand, within QEN71_RS21745at 4825.147 kb on - strand, within QEN71_RS21745at 4825.147 kb on - strand, within QEN71_RS21745at 4825.147 kb on - strand, within QEN71_RS21745at 4825.147 kb on - strand, within QEN71_RS21745at 4825.345 kb on - strandat 4825.388 kb on + strandat 4825.388 kb on + strandat 4825.389 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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4,822,509 - QEN71_RS21735 0.44 +0.1
4,822,523 + QEN71_RS21735 0.45 -0.9
4,822,536 - QEN71_RS21735 0.46 +1.5
4,822,661 + QEN71_RS21735 0.55 -0.4
4,822,661 + QEN71_RS21735 0.55 -0.4
4,822,661 + QEN71_RS21735 0.55 +0.3
4,822,694 + QEN71_RS21735 0.57 -0.9
4,822,694 + QEN71_RS21735 0.57 -1.0
4,822,694 + QEN71_RS21735 0.57 -0.4
4,822,694 + QEN71_RS21735 0.57 +0.3
4,822,695 - QEN71_RS21735 0.57 +0.1
4,822,695 - QEN71_RS21735 0.57 -0.5
4,822,695 - QEN71_RS21735 0.57 -0.3
4,822,730 + QEN71_RS21735 0.59 +0.5
4,823,012 + QEN71_RS21735 0.79 +0.3
4,823,012 + QEN71_RS21735 0.79 -0.4
4,823,012 + QEN71_RS21735 0.79 +0.6
4,823,013 - QEN71_RS21735 0.79 +0.1
4,823,013 - QEN71_RS21735 0.79 +0.5
4,823,013 - QEN71_RS21735 0.79 +0.1
4,823,227 + -0.1
4,823,228 - +0.2
4,823,228 - +0.9
4,823,228 - -0.2
4,823,272 + +1.0
4,823,272 + -1.4
4,823,273 - -0.9
4,823,273 - +0.2
4,823,309 + +0.4
4,823,309 + +0.1
4,823,310 - -0.1
4,823,363 + +0.1
4,823,363 + +0.3
4,823,364 - -1.0
4,823,364 - -0.7
4,823,364 - +0.3
4,823,367 + +0.1
4,823,367 + +0.8
4,823,367 + +0.4
4,823,368 - -0.1
4,823,368 - -0.4
4,823,368 - +0.8
4,823,368 - +0.3
4,823,469 + +1.2
4,823,469 + -0.2
4,823,469 + -0.1
4,823,470 - +0.9
4,823,470 - +0.1
4,823,470 - +0.2
4,823,470 - -1.5
4,823,470 - -2.5
4,823,470 - -0.4
4,823,470 - +0.1
4,823,470 - -0.7
4,823,473 - -0.5
4,823,586 + QEN71_RS21740 0.14 +0.4
4,823,587 - QEN71_RS21740 0.15 -1.7
4,823,587 - QEN71_RS21740 0.15 +0.5
4,823,587 - QEN71_RS21740 0.15 -0.2
4,823,587 - QEN71_RS21740 0.15 +0.4
4,823,607 + QEN71_RS21740 0.16 -0.1
4,824,204 + QEN71_RS21740 0.59 +0.2
4,824,205 - QEN71_RS21740 0.59 -0.0
4,824,205 - QEN71_RS21740 0.59 -0.4
4,824,258 + QEN71_RS21740 0.63 -0.4
4,824,259 - QEN71_RS21740 0.63 -1.8
4,824,272 - QEN71_RS21740 0.64 -1.2
4,824,475 - QEN71_RS21740 0.78 +0.4
4,824,475 - QEN71_RS21740 0.78 +0.9
4,824,585 + QEN71_RS21740 0.86 +0.1
4,824,586 - QEN71_RS21740 0.86 -0.3
4,824,586 - QEN71_RS21740 0.86 -0.4
4,824,612 + QEN71_RS21740 0.88 +1.7
4,824,612 + QEN71_RS21740 0.88 -0.7
4,824,613 - QEN71_RS21740 0.88 -1.2
4,824,613 - QEN71_RS21740 0.88 +0.6
4,824,613 - QEN71_RS21740 0.88 -0.1
4,824,768 - -1.9
4,824,950 - +0.9
4,825,114 + QEN71_RS21745 0.58 +0.2
4,825,114 + QEN71_RS21745 0.58 -1.1
4,825,115 - QEN71_RS21745 0.59 -2.3
4,825,115 - QEN71_RS21745 0.59 -2.4
4,825,115 - QEN71_RS21745 0.59 -0.1
4,825,115 - QEN71_RS21745 0.59 +1.0
4,825,146 + QEN71_RS21745 0.73 +0.2
4,825,146 + QEN71_RS21745 0.73 +1.0
4,825,147 - QEN71_RS21745 0.73 -1.4
4,825,147 - QEN71_RS21745 0.73 -0.2
4,825,147 - QEN71_RS21745 0.73 -0.8
4,825,147 - QEN71_RS21745 0.73 -1.2
4,825,147 - QEN71_RS21745 0.73 -0.7
4,825,345 - -0.3
4,825,388 + -0.3
4,825,388 + +0.1
4,825,389 - -0.1

Or see this region's nucleotide sequence