Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS04490

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS04480 and QEN71_RS04485 are separated by 91 nucleotidesQEN71_RS04485 and QEN71_RS04490 are separated by 15 nucleotidesQEN71_RS04490 and QEN71_RS04495 are separated by 172 nucleotides QEN71_RS04480: QEN71_RS04480 - molybdopterin-binding protein, at 984,003 to 985,298 _RS04480 QEN71_RS04485: QEN71_RS04485 - molybdenum cofactor guanylyltransferase MobA, at 985,390 to 986,004 _RS04485 QEN71_RS04490: QEN71_RS04490 - GTP 3',8-cyclase MoaA, at 986,020 to 987,132 _RS04490 QEN71_RS04495: QEN71_RS04495 - Rne/Rng family ribonuclease, at 987,305 to 990,598 _RS04495 Position (kb) 986 987 988Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.103 kb on + strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.104 kb on - strand, within QEN71_RS04480at 985.258 kb on + strandat 985.258 kb on + strandat 985.259 kb on - strandat 985.259 kb on - strandat 985.259 kb on - strandat 985.259 kb on - strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.431 kb on + strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.432 kb on - strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.436 kb on + strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.437 kb on - strandat 985.487 kb on + strand, within QEN71_RS04485at 985.488 kb on - strand, within QEN71_RS04485at 985.621 kb on - strand, within QEN71_RS04485at 985.621 kb on - strand, within QEN71_RS04485at 985.776 kb on + strand, within QEN71_RS04485at 985.776 kb on + strand, within QEN71_RS04485at 986.021 kb on + strandat 986.021 kb on + strandat 986.021 kb on + strandat 986.033 kb on + strandat 986.033 kb on + strandat 986.033 kb on + strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.034 kb on - strandat 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.222 kb on + strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.223 kb on - strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.462 kb on + strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.463 kb on - strand, within QEN71_RS04490at 986.650 kb on + strand, within QEN71_RS04490at 986.651 kb on - strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.881 kb on + strand, within QEN71_RS04490at 986.882 kb on - strand, within QEN71_RS04490at 986.882 kb on - strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.883 kb on + strand, within QEN71_RS04490at 986.884 kb on - strand, within QEN71_RS04490at 986.910 kb on - strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.942 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.975 kb on + strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 986.976 kb on - strand, within QEN71_RS04490at 987.010 kb on + strand, within QEN71_RS04490at 987.010 kb on + strand, within QEN71_RS04490at 987.010 kb on + strand, within QEN71_RS04490at 987.011 kb on - strand, within QEN71_RS04490at 987.011 kb on - strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.012 kb on + strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.013 kb on - strand, within QEN71_RS04490at 987.042 kb on + strandat 987.042 kb on + strandat 987.042 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.140 kb on + strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.141 kb on - strandat 987.164 kb on + strandat 987.165 kb on - strandat 987.189 kb on + strandat 987.189 kb on + strandat 987.217 kb on - strandat 987.271 kb on - strandat 987.306 kb on + strandat 987.446 kb on - strandat 987.748 kb on + strand, within QEN71_RS04495at 987.749 kb on - strand, within QEN71_RS04495at 987.749 kb on - strand, within QEN71_RS04495at 987.773 kb on - strand, within QEN71_RS04495

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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985,103 + QEN71_RS04480 0.85 -2.3
985,103 + QEN71_RS04480 0.85 -0.1
985,103 + QEN71_RS04480 0.85 -0.1
985,103 + QEN71_RS04480 0.85 -0.7
985,103 + QEN71_RS04480 0.85 -0.4
985,104 - QEN71_RS04480 0.85 -0.1
985,104 - QEN71_RS04480 0.85 +0.9
985,104 - QEN71_RS04480 0.85 -0.3
985,104 - QEN71_RS04480 0.85 -1.3
985,104 - QEN71_RS04480 0.85 -0.6
985,258 + -0.4
985,258 + +1.0
985,259 - -1.2
985,259 - -0.2
985,259 - -1.4
985,259 - -0.8
985,431 + +2.4
985,431 + -1.0
985,431 + +0.5
985,431 + -0.5
985,431 + -1.0
985,431 + -0.6
985,431 + -0.0
985,432 - +0.6
985,432 - -0.2
985,432 - +0.1
985,432 - -0.5
985,432 - +0.3
985,432 - +0.6
985,432 - +2.0
985,432 - +1.6
985,436 + +0.3
985,436 + +1.5
985,436 + -0.6
985,436 + +0.4
985,436 + -1.1
985,437 - +0.4
985,437 - +0.3
985,437 - +1.2
985,437 - +0.3
985,437 - -1.5
985,437 - -0.0
985,487 + QEN71_RS04485 0.16 -0.1
985,488 - QEN71_RS04485 0.16 +0.1
985,621 - QEN71_RS04485 0.38 -0.5
985,621 - QEN71_RS04485 0.38 -0.9
985,776 + QEN71_RS04485 0.63 +0.6
985,776 + QEN71_RS04485 0.63 -1.1
986,021 + -0.9
986,021 + +0.5
986,021 + -0.3
986,033 + +1.5
986,033 + -0.5
986,033 + +0.8
986,034 - +2.9
986,034 - -0.1
986,034 - -0.5
986,034 - +0.4
986,034 - -1.9
986,034 - +0.6
986,222 + QEN71_RS04490 0.18 -0.7
986,222 + QEN71_RS04490 0.18 +1.6
986,222 + QEN71_RS04490 0.18 -2.1
986,222 + QEN71_RS04490 0.18 +0.1
986,222 + QEN71_RS04490 0.18 +0.1
986,222 + QEN71_RS04490 0.18 -1.4
986,222 + QEN71_RS04490 0.18 +0.7
986,222 + QEN71_RS04490 0.18 +0.6
986,222 + QEN71_RS04490 0.18 +0.7
986,222 + QEN71_RS04490 0.18 +1.8
986,222 + QEN71_RS04490 0.18 +0.7
986,222 + QEN71_RS04490 0.18 -0.4
986,223 - QEN71_RS04490 0.18 +0.7
986,223 - QEN71_RS04490 0.18 -0.1
986,223 - QEN71_RS04490 0.18 -0.5
986,223 - QEN71_RS04490 0.18 +0.4
986,223 - QEN71_RS04490 0.18 -0.9
986,223 - QEN71_RS04490 0.18 +0.6
986,223 - QEN71_RS04490 0.18 +0.7
986,223 - QEN71_RS04490 0.18 +0.6
986,462 + QEN71_RS04490 0.40 +0.2
986,462 + QEN71_RS04490 0.40 +0.5
986,462 + QEN71_RS04490 0.40 +0.7
986,462 + QEN71_RS04490 0.40 -0.6
986,462 + QEN71_RS04490 0.40 -0.1
986,462 + QEN71_RS04490 0.40 -0.3
986,462 + QEN71_RS04490 0.40 +1.1
986,462 + QEN71_RS04490 0.40 +0.3
986,462 + QEN71_RS04490 0.40 +0.1
986,463 - QEN71_RS04490 0.40 +1.7
986,463 - QEN71_RS04490 0.40 -1.2
986,463 - QEN71_RS04490 0.40 -2.4
986,463 - QEN71_RS04490 0.40 +2.5
986,463 - QEN71_RS04490 0.40 +0.1
986,463 - QEN71_RS04490 0.40 -0.9
986,463 - QEN71_RS04490 0.40 -0.3
986,463 - QEN71_RS04490 0.40 -0.1
986,463 - QEN71_RS04490 0.40 +1.6
986,463 - QEN71_RS04490 0.40 +0.6
986,463 - QEN71_RS04490 0.40 +1.5
986,463 - QEN71_RS04490 0.40 +0.5
986,463 - QEN71_RS04490 0.40 -0.2
986,463 - QEN71_RS04490 0.40 -0.1
986,463 - QEN71_RS04490 0.40 +0.1
986,650 + QEN71_RS04490 0.57 -1.8
986,651 - QEN71_RS04490 0.57 -2.2
986,881 + QEN71_RS04490 0.77 -0.4
986,881 + QEN71_RS04490 0.77 +0.4
986,881 + QEN71_RS04490 0.77 +0.5
986,881 + QEN71_RS04490 0.77 -0.1
986,882 - QEN71_RS04490 0.77 -1.4
986,882 - QEN71_RS04490 0.77 -1.8
986,883 + QEN71_RS04490 0.78 -0.3
986,883 + QEN71_RS04490 0.78 +2.3
986,883 + QEN71_RS04490 0.78 +1.8
986,883 + QEN71_RS04490 0.78 -1.1
986,883 + QEN71_RS04490 0.78 -0.4
986,884 - QEN71_RS04490 0.78 -0.4
986,910 - QEN71_RS04490 0.80 -1.4
986,942 + QEN71_RS04490 0.83 -2.2
986,942 + QEN71_RS04490 0.83 -1.6
986,942 + QEN71_RS04490 0.83 -0.2
986,942 + QEN71_RS04490 0.83 +0.5
986,975 + QEN71_RS04490 0.86 -0.3
986,975 + QEN71_RS04490 0.86 +0.2
986,975 + QEN71_RS04490 0.86 -0.1
986,975 + QEN71_RS04490 0.86 -1.6
986,975 + QEN71_RS04490 0.86 +0.7
986,976 - QEN71_RS04490 0.86 -1.7
986,976 - QEN71_RS04490 0.86 +1.1
986,976 - QEN71_RS04490 0.86 +0.8
986,976 - QEN71_RS04490 0.86 -0.4
986,976 - QEN71_RS04490 0.86 +1.0
986,976 - QEN71_RS04490 0.86 +0.0
986,976 - QEN71_RS04490 0.86 +0.9
986,976 - QEN71_RS04490 0.86 -1.6
987,010 + QEN71_RS04490 0.89 -1.6
987,010 + QEN71_RS04490 0.89 -0.5
987,010 + QEN71_RS04490 0.89 -0.6
987,011 - QEN71_RS04490 0.89 -0.6
987,011 - QEN71_RS04490 0.89 +1.3
987,012 + QEN71_RS04490 0.89 +0.1
987,012 + QEN71_RS04490 0.89 -0.5
987,012 + QEN71_RS04490 0.89 +0.5
987,012 + QEN71_RS04490 0.89 +0.1
987,012 + QEN71_RS04490 0.89 +0.7
987,012 + QEN71_RS04490 0.89 -0.3
987,012 + QEN71_RS04490 0.89 -0.4
987,012 + QEN71_RS04490 0.89 +1.5
987,012 + QEN71_RS04490 0.89 -0.9
987,013 - QEN71_RS04490 0.89 -0.2
987,013 - QEN71_RS04490 0.89 +0.7
987,013 - QEN71_RS04490 0.89 +0.5
987,013 - QEN71_RS04490 0.89 -0.9
987,013 - QEN71_RS04490 0.89 -1.4
987,013 - QEN71_RS04490 0.89 +0.1
987,013 - QEN71_RS04490 0.89 -0.1
987,013 - QEN71_RS04490 0.89 -1.5
987,013 - QEN71_RS04490 0.89 -2.2
987,042 + -0.2
987,042 + +0.4
987,042 + +0.9
987,140 + -0.2
987,140 + -0.9
987,140 + -1.3
987,140 + +1.6
987,140 + -0.4
987,140 + -0.5
987,140 + -0.1
987,140 + +2.4
987,140 + +0.7
987,140 + +0.4
987,141 - -2.0
987,141 - +1.1
987,141 - +0.1
987,141 - +0.2
987,141 - -0.5
987,141 - -0.4
987,141 - -0.4
987,141 - -1.2
987,141 - -0.6
987,141 - -0.7
987,164 + -0.4
987,165 - -0.1
987,189 + +0.5
987,189 + +0.2
987,217 - -0.6
987,271 - -0.8
987,306 + -0.2
987,446 - +1.3
987,748 + QEN71_RS04495 0.13 -2.9
987,749 - QEN71_RS04495 0.13 +0.1
987,749 - QEN71_RS04495 0.13 +0.9
987,773 - QEN71_RS04495 0.14 +0.5

Or see this region's nucleotide sequence