Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03692

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
4,122,293	-				+0.6
4,122,310	-				+0.2
4,122,371	-		MIT1002_03691	0.11	+0.5
4,122,421	+		MIT1002_03691	0.16	+0.6
4,122,421	+		MIT1002_03691	0.16	+1.1
4,122,421	+		MIT1002_03691	0.16	-0.0
4,122,421	+		MIT1002_03691	0.16	-1.9
4,122,421	+		MIT1002_03691	0.16	-3.0
4,122,430	-		MIT1002_03691	0.17	+0.8
4,122,435	+		MIT1002_03691	0.18	-0.1
4,122,437	-		MIT1002_03691	0.18	-1.9
4,122,437	-		MIT1002_03691	0.18	+0.5
4,122,443	-		MIT1002_03691	0.19	-1.4
4,122,449	-		MIT1002_03691	0.19	+0.4
4,122,473	+		MIT1002_03691	0.22	-0.2
4,122,473	+		MIT1002_03691	0.22	+1.9
4,122,587	+		MIT1002_03691	0.34	-0.1
4,122,604	+		MIT1002_03691	0.36	+2.2
4,122,606	+		MIT1002_03691	0.36	-0.5
4,122,606	+		MIT1002_03691	0.36	+0.3
4,122,639	+		MIT1002_03691	0.40	+1.5
4,122,639	-		MIT1002_03691	0.40	+0.1
4,122,641	+		MIT1002_03691	0.40	+1.4
4,122,648	+		MIT1002_03691	0.41	+0.4
4,122,649	-		MIT1002_03691	0.41	+0.2
4,122,649	-		MIT1002_03691	0.41	+0.1
4,122,653	+		MIT1002_03691	0.41	-0.5
4,122,656	-		MIT1002_03691	0.42	+0.7
4,122,656	-		MIT1002_03691	0.42	-5.2
4,122,661	-		MIT1002_03691	0.42	+3.1
4,122,661	-		MIT1002_03691	0.42	-0.4
4,122,661	-		MIT1002_03691	0.42	-1.3
4,122,661	-		MIT1002_03691	0.42	-0.0
4,122,666	-		MIT1002_03691	0.43	-2.3
4,122,792	-		MIT1002_03691	0.56	+0.4
4,122,850	-		MIT1002_03691	0.63	+0.3
4,122,877	-		MIT1002_03691	0.66	+0.7
4,122,884	-		MIT1002_03691	0.66	-0.1
4,122,884	-		MIT1002_03691	0.66	+0.0
4,122,889	+		MIT1002_03691	0.67	-0.3
4,122,891	+		MIT1002_03691	0.67	-2.3
4,122,900	+		MIT1002_03691	0.68	+0.3
4,123,019	+		MIT1002_03691	0.81	+1.0
4,123,029	+		MIT1002_03691	0.82	+1.1
4,123,097	-		MIT1002_03691	0.90	-2.2
4,123,185	+				+0.1
4,123,185	+				+0.3
4,123,185	+				+1.2
4,123,185	+				-0.9
4,123,185	+				+1.6
4,123,185	+				+0.6
4,123,185	+				+0.9
4,123,185	+				-0.3
4,123,185	+				-0.5
4,123,185	+				-0.2
4,123,185	+				-0.2
4,123,187	+				-0.2
4,123,202	+				+0.5
4,123,299	+				+0.4
4,123,304	+				-0.1
4,123,456	+		MIT1002_03692	0.12	-0.1
4,123,559	+		MIT1002_03692	0.20	+0.3
4,123,612	+		MIT1002_03692	0.24	+1.4
4,123,612	+		MIT1002_03692	0.24	-0.6
4,123,612	+		MIT1002_03692	0.24	+0.1
4,123,612	+		MIT1002_03692	0.24	-0.4
4,123,612	+		MIT1002_03692	0.24	-1.9
4,123,720	+		MIT1002_03692	0.32	-0.6
4,123,745	+		MIT1002_03692	0.34	-0.1
4,123,923	+		MIT1002_03692	0.48	-0.2
4,124,004	+		MIT1002_03692	0.54	-1.5
4,124,110	+		MIT1002_03692	0.62	-0.2
4,124,171	+		MIT1002_03692	0.67	-1.2
4,124,265	+		MIT1002_03692	0.74	-0.6
4,124,297	-		MIT1002_03692	0.76	+1.0
4,124,310	+		MIT1002_03692	0.77	+1.0
4,124,395	+		MIT1002_03692	0.84	+0.5
4,124,411	+		MIT1002_03692	0.85	-0.9
4,124,516	+				+0.7
4,124,586	-				-0.4
4,124,598	+				+0.4
4,125,076	-				-1.2