Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03643

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
4,075,352	+		MIT1002_03642	0.77	-1.4
4,075,360	-		MIT1002_03642	0.78	-0.0
4,075,371	-		MIT1002_03642	0.78	+0.4
4,075,397	-		MIT1002_03642	0.79	+0.7
4,075,411	+		MIT1002_03642	0.79	+0.7
4,075,453	+		MIT1002_03642	0.81	+0.2
4,075,453	+		MIT1002_03642	0.81	+0.5
4,075,513	-		MIT1002_03642	0.82	-1.1
4,075,532	+		MIT1002_03642	0.83	+0.3
4,075,538	-		MIT1002_03642	0.83	-2.3
4,075,540	-		MIT1002_03642	0.83	-0.0
4,075,596	+		MIT1002_03642	0.85	+1.3
4,075,604	-		MIT1002_03642	0.85	-0.1
4,075,604	-		MIT1002_03642	0.85	+0.0
4,075,616	+		MIT1002_03642	0.85	+0.4
4,075,616	+		MIT1002_03642	0.85	+1.4
4,075,669	+		MIT1002_03642	0.87	+1.6
4,075,687	-		MIT1002_03642	0.88	-1.8
4,075,697	-		MIT1002_03642	0.88	+1.9
4,075,707	-		MIT1002_03642	0.88	-0.3
4,075,714	+		MIT1002_03642	0.88	-0.2
4,075,808	+				+0.4
4,075,907	-				+0.4
4,075,929	+				-0.2
4,075,941	+				+0.3
4,075,941	+				+1.6
4,075,941	+				-1.1
4,076,022	-				+0.3
4,076,116	+				+1.1
4,076,298	+				-0.8
4,076,317	-				-0.3
4,076,595	+		MIT1002_03643	0.47	-0.4
4,076,602	+		MIT1002_03643	0.48	-0.9
4,076,603	-		MIT1002_03643	0.48	-0.2
4,076,603	-		MIT1002_03643	0.48	-1.0
4,076,610	-		MIT1002_03643	0.49	-0.4
4,076,615	-		MIT1002_03643	0.50	+0.6
4,076,615	-		MIT1002_03643	0.50	-0.1
4,076,641	+		MIT1002_03643	0.55	-1.2
4,076,659	+		MIT1002_03643	0.58	-1.2
4,076,694	-		MIT1002_03643	0.65	+0.5
4,076,790	+		MIT1002_03643	0.82	-0.9
4,076,790	-		MIT1002_03643	0.82	-0.7
4,076,792	+		MIT1002_03643	0.83	-1.6
4,076,795	-		MIT1002_03643	0.83	+0.2
4,076,798	-		MIT1002_03643	0.84	+0.6
4,076,849	+				-0.8
4,076,865	-				+0.0
4,076,912	-				+1.5
4,076,922	+				+0.8
4,076,942	-				-0.5
4,076,956	-				+1.3
4,076,965	-				+0.7
4,076,981	+				+0.9
4,076,989	-				+0.3
4,077,000	+				+1.2
4,077,005	+				-0.2
4,077,005	+				-0.8
4,077,005	+				-0.8
4,077,005	+				-0.2
4,077,005	+				-0.5
4,077,005	+				+0.9
4,077,005	+				+1.0
4,077,013	-				-1.1
4,077,013	-				-0.0
4,077,013	-				+0.5
4,077,013	-				-0.5
4,077,015	+				+0.4
4,077,015	+				-1.0
4,077,042	+		MIT1002_03644	0.11	-2.1
4,077,235	+		MIT1002_03644	0.26	-0.8
4,077,263	+		MIT1002_03644	0.28	-0.8
4,077,263	+		MIT1002_03644	0.28	-2.1
4,077,271	-		MIT1002_03644	0.29	-0.1
4,077,284	+		MIT1002_03644	0.30	+1.0
4,077,285	-		MIT1002_03644	0.30	+0.4
4,077,382	+		MIT1002_03644	0.38	+0.3
4,077,382	+		MIT1002_03644	0.38	+0.1
4,077,553	+		MIT1002_03644	0.51	+1.0
4,077,553	+		MIT1002_03644	0.51	-0.9
4,077,561	-		MIT1002_03644	0.52	+0.3
4,077,561	-		MIT1002_03644	0.52	+1.1
4,077,561	-		MIT1002_03644	0.52	+1.6
4,077,561	-		MIT1002_03644	0.52	+0.0
4,077,568	+		MIT1002_03644	0.53	+1.0
4,077,573	+		MIT1002_03644	0.53	-0.7
4,077,573	+		MIT1002_03644	0.53	-0.0
4,077,576	-		MIT1002_03644	0.53	-0.6
4,077,578	+		MIT1002_03644	0.53	+0.4
4,077,578	+		MIT1002_03644	0.53	+0.8
4,077,581	-		MIT1002_03644	0.54	-1.0
4,077,586	-		MIT1002_03644	0.54	+0.9
4,077,746	+		MIT1002_03644	0.67	+0.2
4,077,746	+		MIT1002_03644	0.67	-1.7
4,077,757	-		MIT1002_03644	0.68	-0.3
4,077,827	+		MIT1002_03644	0.73	+0.1
4,077,830	-		MIT1002_03644	0.73	+0.2
4,077,837	+		MIT1002_03644	0.74	-1.8
4,077,847	+		MIT1002_03644	0.75	-0.9
4,077,871	-		MIT1002_03644	0.77	-0.9