Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03511

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,923,864	+				+3.3
3,923,869	+				+2.4
3,923,914	-				+1.8
3,923,914	-				+1.9
3,923,962	+				-0.9
3,923,977	+				+0.9
3,923,977	+				-0.1
3,923,977	+				+0.2
3,923,985	-				-0.1
3,923,985	-				+1.0
3,923,985	-				+2.2
3,923,985	-				-0.6
3,923,985	-				+0.1
3,923,985	-				-0.7
3,923,985	-				-1.0
3,923,985	-				+0.1
3,923,999	-				+0.3
3,924,051	+		MIT1002_03510	0.17	+0.4
3,924,056	+		MIT1002_03510	0.18	+0.8
3,924,059	-		MIT1002_03510	0.19	+1.2
3,924,059	-		MIT1002_03510	0.19	-1.2
3,924,059	-		MIT1002_03510	0.19	+0.7
3,924,098	-		MIT1002_03510	0.25	-0.3
3,924,114	+		MIT1002_03510	0.27	-0.6
3,924,160	+		MIT1002_03510	0.35	-0.9
3,924,277	+		MIT1002_03510	0.54	-0.5
3,924,277	+		MIT1002_03510	0.54	+1.6
3,924,308	+		MIT1002_03510	0.58	-1.0
3,924,316	-		MIT1002_03510	0.60	-0.2
3,924,492	+		MIT1002_03510	0.88	+1.5
3,924,500	-		MIT1002_03510	0.89	-1.2
3,924,527	+				+1.3
3,924,527	+				+0.9
3,924,535	-				-0.3
3,924,535	-				-1.8
3,924,535	-				-0.6
3,924,649	-				+0.2
3,924,718	+				+0.3
3,924,885	+				-1.0
3,924,885	+				-1.0
3,924,906	+				-0.0
3,924,906	+				+0.6
3,924,906	+				-1.6
3,924,911	+				-1.9
3,924,950	-		MIT1002_03511	0.12	+0.8
3,924,950	-		MIT1002_03511	0.12	+0.3
3,924,953	-		MIT1002_03511	0.12	+0.6
3,924,955	-		MIT1002_03511	0.12	-2.7
3,924,958	-		MIT1002_03511	0.13	-0.5
3,924,960	+		MIT1002_03511	0.13	-0.2
3,924,960	+		MIT1002_03511	0.13	-0.4
3,924,968	-		MIT1002_03511	0.14	+0.4
3,924,989	+		MIT1002_03511	0.16	-0.6
3,925,010	-		MIT1002_03511	0.18	+0.2
3,925,092	+		MIT1002_03511	0.27	+0.7
3,925,102	+		MIT1002_03511	0.29	+0.3
3,925,102	+		MIT1002_03511	0.29	+0.1
3,925,104	-		MIT1002_03511	0.29	-1.3
3,925,104	-		MIT1002_03511	0.29	+0.6
3,925,104	-		MIT1002_03511	0.29	-0.6
3,925,110	-		MIT1002_03511	0.29	+3.4
3,925,110	-		MIT1002_03511	0.29	+1.2
3,925,110	-		MIT1002_03511	0.29	+0.9
3,925,110	-		MIT1002_03511	0.29	+0.1
3,925,184	+		MIT1002_03511	0.38	+0.1
3,925,197	-		MIT1002_03511	0.39	-0.2
3,925,203	-		MIT1002_03511	0.40	+0.6
3,925,276	-		MIT1002_03511	0.48	-1.5
3,925,285	+		MIT1002_03511	0.49	+0.2
3,925,293	-		MIT1002_03511	0.50	-1.5
3,925,338	+		MIT1002_03511	0.55	-0.9
3,925,340	+		MIT1002_03511	0.55	-0.2
3,925,396	+		MIT1002_03511	0.61	+0.4
3,925,482	-		MIT1002_03511	0.71	+0.6
3,925,527	-		MIT1002_03511	0.75	-1.8
3,925,529	+		MIT1002_03511	0.76	+0.9
3,925,568	+		MIT1002_03511	0.80	+1.9
3,925,666	+				-0.7
3,925,708	+				+0.0
3,925,743	+				-0.2
3,925,751	-				-0.1
3,925,895	-				-2.4
3,925,915	-		MIT1002_03512	0.11	-0.1
3,925,952	-		MIT1002_03512	0.15	-2.7
3,926,035	+		MIT1002_03512	0.23	+1.9
3,926,036	-		MIT1002_03512	0.23	+0.4
3,926,043	-		MIT1002_03512	0.24	+1.7
3,926,055	+		MIT1002_03512	0.25	+1.0
3,926,075	-		MIT1002_03512	0.27	+0.1
3,926,084	-		MIT1002_03512	0.28	-0.6
3,926,209	+		MIT1002_03512	0.40	+1.0
3,926,216	+		MIT1002_03512	0.41	+0.9
3,926,235	-		MIT1002_03512	0.42	-1.3
3,926,265	+		MIT1002_03512	0.45	+0.1
3,926,265	+		MIT1002_03512	0.45	-0.0
3,926,265	+		MIT1002_03512	0.45	+0.2
3,926,265	+		MIT1002_03512	0.45	+1.5
3,926,265	+		MIT1002_03512	0.45	-0.9
3,926,265	+		MIT1002_03512	0.45	-0.6
3,926,273	-		MIT1002_03512	0.46	-0.4
3,926,273	-		MIT1002_03512	0.46	+0.0
3,926,273	-		MIT1002_03512	0.46	-1.2
3,926,273	-		MIT1002_03512	0.46	-0.9
3,926,273	-		MIT1002_03512	0.46	+1.3
3,926,273	-		MIT1002_03512	0.46	-2.6
3,926,275	+		MIT1002_03512	0.46	+0.4
3,926,275	+		MIT1002_03512	0.46	-0.3
3,926,321	+		MIT1002_03512	0.51	-1.8
3,926,321	-		MIT1002_03512	0.51	-0.7
3,926,329	-		MIT1002_03512	0.52	-0.0
3,926,334	-		MIT1002_03512	0.52	-2.7
3,926,664	-		MIT1002_03512	0.84	-0.8
3,926,735	-				+1.3