Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03425

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,826,949	+				+0.7
3,826,968	+				-0.1
3,827,034	-		MIT1002_03424	0.15	-0.6
3,827,149	-		MIT1002_03424	0.29	-0.2
3,827,159	-		MIT1002_03424	0.30	+1.1
3,827,196	-		MIT1002_03424	0.34	-0.1
3,827,196	-		MIT1002_03424	0.34	+0.7
3,827,251	-		MIT1002_03424	0.41	+0.1
3,827,315	-		MIT1002_03424	0.49	-1.3
3,827,402	-		MIT1002_03424	0.59	+1.2
3,827,608	+		MIT1002_03424	0.84	-1.7
3,827,608	+		MIT1002_03424	0.84	-0.6
3,827,608	+		MIT1002_03424	0.84	-0.3
3,827,608	+		MIT1002_03424	0.84	-0.3
3,827,616	-		MIT1002_03424	0.85	-0.3
3,827,616	-		MIT1002_03424	0.85	+0.8
3,827,625	-		MIT1002_03424	0.86	+0.3
3,827,676	+				+1.0
3,827,747	+				+0.1
3,827,815	+				-0.8
3,827,823	-				+0.3
3,827,823	-				+0.4
3,827,845	+				-1.9
3,827,877	+				-3.2
3,827,877	+				+0.2
3,827,883	-				+0.6
3,827,885	-				+1.1
3,827,890	-				+0.3
3,827,897	+				+1.1
3,827,961	-				-0.3
3,827,987	-				+0.5
3,828,039	-		MIT1002_03425	0.16	+0.6
3,828,077	-		MIT1002_03425	0.21	-0.8
3,828,106	+		MIT1002_03425	0.24	-1.3
3,828,167	+		MIT1002_03425	0.32	-0.1
3,828,197	+		MIT1002_03425	0.36	-1.3
3,828,197	+		MIT1002_03425	0.36	+0.1
3,828,205	-		MIT1002_03425	0.37	+0.5
3,828,205	-		MIT1002_03425	0.37	-0.6
3,828,205	-		MIT1002_03425	0.37	+0.7
3,828,205	-		MIT1002_03425	0.37	+0.9
3,828,225	-		MIT1002_03425	0.39	+0.2
3,828,233	+		MIT1002_03425	0.40	+0.1
3,828,278	+		MIT1002_03425	0.46	-0.2
3,828,278	+		MIT1002_03425	0.46	+0.1
3,828,278	+		MIT1002_03425	0.46	+0.3
3,828,286	-		MIT1002_03425	0.46	-0.7
3,828,286	-		MIT1002_03425	0.46	-0.1
3,828,289	-		MIT1002_03425	0.47	-1.5
3,828,347	-		MIT1002_03425	0.54	-0.0
3,828,400	-		MIT1002_03425	0.61	+0.4
3,828,422	+		MIT1002_03425	0.63	-0.4
3,828,554	-		MIT1002_03425	0.79	-1.9
3,828,596	-		MIT1002_03425	0.85	-0.4
3,828,666	-				+1.2
3,828,666	-				-0.4
3,828,671	-				-1.4
3,828,671	-				-0.2
3,828,673	+				-0.2
3,828,699	-				+1.7
3,828,769	+				+0.7
3,828,769	+				-1.9
3,828,769	+				-1.3
3,828,769	+				-0.6
3,828,769	+				-0.6
3,828,769	+				-1.2
3,828,777	-				+0.3
3,828,777	-				-0.6
3,828,777	-				+0.3
3,828,791	+				-0.1
3,828,854	-				-1.1
3,828,866	-				-0.2
3,828,964	+				-0.7
3,828,969	+				+0.4
3,828,985	+		MIT1002_03426	0.11	+0.7
3,828,992	+		MIT1002_03426	0.11	-1.5
3,828,993	-		MIT1002_03426	0.11	-1.7
3,828,993	-		MIT1002_03426	0.11	-1.3
3,829,062	+		MIT1002_03426	0.16	-1.7
3,829,070	-		MIT1002_03426	0.17	-0.3
3,829,107	+		MIT1002_03426	0.19	-1.2
3,829,131	+		MIT1002_03426	0.21	-1.7
3,829,159	-		MIT1002_03426	0.23	-0.9
3,829,223	-		MIT1002_03426	0.27	-1.9
3,829,232	-		MIT1002_03426	0.28	+0.3
3,829,340	-		MIT1002_03426	0.36	-2.9
3,829,415	+		MIT1002_03426	0.41	-1.4
3,829,420	+		MIT1002_03426	0.41	-0.2
3,829,420	+		MIT1002_03426	0.41	+1.1
3,829,420	+		MIT1002_03426	0.41	-2.4
3,829,422	+		MIT1002_03426	0.41	+0.9
3,829,428	-		MIT1002_03426	0.42	-1.5
3,829,428	-		MIT1002_03426	0.42	-0.4
3,829,428	-		MIT1002_03426	0.42	-2.9
3,829,466	+		MIT1002_03426	0.44	-1.5
3,829,479	+		MIT1002_03426	0.45	-1.3
3,829,487	-		MIT1002_03426	0.46	+1.0
3,829,489	-		MIT1002_03426	0.46	-2.0
3,829,516	-		MIT1002_03426	0.48	-1.6
3,829,521	+		MIT1002_03426	0.48	-0.8
3,829,529	-		MIT1002_03426	0.49	+0.5
3,829,570	+		MIT1002_03426	0.52	-1.1
3,829,612	+		MIT1002_03426	0.55	-0.3
3,829,612	+		MIT1002_03426	0.55	-0.6
3,829,628	-		MIT1002_03426	0.56	-0.4
3,829,654	+		MIT1002_03426	0.58	-2.1
3,829,654	+		MIT1002_03426	0.58	-3.1
3,829,662	-		MIT1002_03426	0.58	-0.3
3,829,701	+		MIT1002_03426	0.61	-1.4