Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03340

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,731,068	+				-0.4
3,731,083	+				+0.6
3,731,113	+				+0.6
3,731,118	+				-1.2
3,731,122	-				-1.5
3,731,126	-				+0.5
3,731,128	+				+1.4
3,731,128	+				-0.2
3,731,135	+				-0.6
3,731,136	+				-0.9
3,731,143	-				-0.7
3,731,168	+				+1.0
3,731,168	+				-0.4
3,731,268	+				+0.1
3,731,268	+				+0.1
3,731,413	+		MIT1002_03339	0.10	-0.4
3,731,421	-		MIT1002_03339	0.11	+0.1
3,731,455	-		MIT1002_03339	0.16	+0.1
3,731,483	+		MIT1002_03339	0.21	+1.0
3,731,483	+		MIT1002_03339	0.21	+0.6
3,731,518	-		MIT1002_03339	0.26	+1.8
3,731,576	+		MIT1002_03339	0.35	+0.8
3,731,576	+		MIT1002_03339	0.35	-1.9
3,731,584	-		MIT1002_03339	0.36	+0.0
3,731,584	-		MIT1002_03339	0.36	+0.7
3,731,584	-		MIT1002_03339	0.36	+2.4
3,731,643	-		MIT1002_03339	0.45	+1.3
3,731,684	+		MIT1002_03339	0.51	-0.9
3,731,765	+		MIT1002_03339	0.64	-0.7
3,731,765	+		MIT1002_03339	0.64	+0.0
3,731,765	+		MIT1002_03339	0.64	+0.1
3,731,765	+		MIT1002_03339	0.64	+1.1
3,731,765	+		MIT1002_03339	0.64	-0.1
3,731,765	+		MIT1002_03339	0.64	+1.0
3,731,765	+		MIT1002_03339	0.64	-0.8
3,731,765	+		MIT1002_03339	0.64	+0.3
3,731,765	+		MIT1002_03339	0.64	+0.5
3,731,765	+		MIT1002_03339	0.64	-0.3
3,731,773	-		MIT1002_03339	0.65	+0.9
3,731,773	-		MIT1002_03339	0.65	+0.3
3,731,773	-		MIT1002_03339	0.65	+0.5
3,731,773	-		MIT1002_03339	0.65	-0.0
3,731,773	-		MIT1002_03339	0.65	-1.5
3,731,773	-		MIT1002_03339	0.65	-0.3
3,731,773	-		MIT1002_03339	0.65	+0.7
3,731,773	-		MIT1002_03339	0.65	-0.7
3,731,773	-		MIT1002_03339	0.65	-0.4
3,731,773	-		MIT1002_03339	0.65	-0.9
3,731,773	-		MIT1002_03339	0.65	-0.4
3,731,773	-		MIT1002_03339	0.65	+0.6
3,731,773	-		MIT1002_03339	0.65	+0.6
3,731,773	-		MIT1002_03339	0.65	-0.3
3,731,773	-		MIT1002_03339	0.65	+0.3
3,731,879	+		MIT1002_03339	0.81	-1.6
3,731,925	+		MIT1002_03339	0.88	-0.9
3,731,933	-		MIT1002_03339	0.89	+0.1
3,731,960	+				+0.6
3,731,979	-				-0.2
3,732,045	+				-0.2
3,732,046	+				-1.3
3,732,050	+				+1.3
3,732,058	-				+0.5
3,732,058	-				+0.5
3,732,065	+				-0.2
3,732,065	+				+0.7
3,732,073	-				+0.7
3,732,073	-				-1.3
3,732,073	-				-1.2
3,732,073	-				-0.9
3,732,073	-				-0.1
3,732,073	-				-0.2
3,732,139	-				+1.0
3,732,170	+		MIT1002_03340	0.11	-1.3
3,732,194	-		MIT1002_03340	0.12	+0.2
3,732,245	+		MIT1002_03340	0.15	+0.4
3,732,269	+		MIT1002_03340	0.17	+2.2
3,732,415	+		MIT1002_03340	0.26	-0.3
3,732,423	-		MIT1002_03340	0.27	+0.3
3,732,423	-		MIT1002_03340	0.27	+1.3
3,732,591	+		MIT1002_03340	0.38	-0.2
3,732,599	-		MIT1002_03340	0.38	-0.2
3,732,630	+		MIT1002_03340	0.40	-0.6
3,732,640	+		MIT1002_03340	0.41	+0.7
3,732,640	+		MIT1002_03340	0.41	-1.9
3,732,640	+		MIT1002_03340	0.41	+1.1
3,732,648	-		MIT1002_03340	0.41	-0.1
3,732,648	-		MIT1002_03340	0.41	-1.3
3,732,648	-		MIT1002_03340	0.41	+1.4
3,732,648	-		MIT1002_03340	0.41	-0.7
3,732,648	-		MIT1002_03340	0.41	+0.6
3,732,648	-		MIT1002_03340	0.41	-1.5
3,732,648	-		MIT1002_03340	0.41	+1.1
3,732,707	+		MIT1002_03340	0.45	-2.2
3,732,729	+		MIT1002_03340	0.46	+1.0
3,732,763	+		MIT1002_03340	0.49	-1.7
3,732,763	+		MIT1002_03340	0.49	-1.7
3,732,793	+		MIT1002_03340	0.50	-0.5
3,732,806	-		MIT1002_03340	0.51	-0.3
3,732,865	+		MIT1002_03340	0.55	+0.5
3,732,940	+		MIT1002_03340	0.60	-1.4
3,732,940	+		MIT1002_03340	0.60	-0.5
3,733,010	+		MIT1002_03340	0.64	-0.8
3,733,010	-		MIT1002_03340	0.64	-1.3
3,733,015	+		MIT1002_03340	0.65	+0.9
3,733,023	-		MIT1002_03340	0.65	-0.4
3,733,079	-		MIT1002_03340	0.69	-0.6
3,733,091	+		MIT1002_03340	0.69	-0.4
3,733,104	+		MIT1002_03340	0.70	-0.3
3,733,105	-		MIT1002_03340	0.70	-0.1
3,733,112	-		MIT1002_03340	0.71	-0.0
3,733,129	+		MIT1002_03340	0.72	+0.8
3,733,129	+		MIT1002_03340	0.72	-0.1
3,733,204	-		MIT1002_03340	0.77	+0.3
3,733,221	+		MIT1002_03340	0.78	-2.2
3,733,241	+		MIT1002_03340	0.79	+0.1
3,733,252	+		MIT1002_03340	0.80	-0.4
3,733,252	+		MIT1002_03340	0.80	+0.9
3,733,260	-		MIT1002_03340	0.80	-0.1
3,733,260	-		MIT1002_03340	0.80	-0.8
3,733,260	-		MIT1002_03340	0.80	+1.7
3,733,260	-		MIT1002_03340	0.80	+0.6
3,733,262	-		MIT1002_03340	0.80	-2.1
3,733,299	+		MIT1002_03340	0.83	-0.1
3,733,321	+		MIT1002_03340	0.84	-0.4
3,733,368	+		MIT1002_03340	0.87	-0.7
3,733,376	-		MIT1002_03340	0.88	-0.0
3,733,384	+		MIT1002_03340	0.88	+0.4
3,733,386	-		MIT1002_03340	0.88	+0.2
3,733,422	-				-0.2
3,733,537	+				+0.0
3,733,553	+				+1.6
3,733,563	+				+0.1
3,733,694	-				+1.3
3,733,705	-				-3.6
3,733,768	+		MIT1002_03341	0.14	-0.0
3,733,768	+		MIT1002_03341	0.14	+0.8
3,733,768	+		MIT1002_03341	0.14	+1.0
3,733,794	-		MIT1002_03341	0.17	+1.1
3,733,808	-		MIT1002_03341	0.19	-0.3
3,733,820	-		MIT1002_03341	0.21	-0.2
3,733,868	+		MIT1002_03341	0.26	-0.9
3,733,871	+		MIT1002_03341	0.27	-0.0
3,733,873	+		MIT1002_03341	0.27	+0.6
3,733,876	-		MIT1002_03341	0.27	-0.5
3,733,927	-		MIT1002_03341	0.34	+1.0
3,733,945	+		MIT1002_03341	0.36	-0.6
3,733,984	-		MIT1002_03341	0.41	+0.2
3,734,003	+		MIT1002_03341	0.43	+0.7
3,734,045	-		MIT1002_03341	0.48	-0.4
3,734,054	+		MIT1002_03341	0.49	+0.6
3,734,079	-		MIT1002_03341	0.52	+0.3
3,734,099	-		MIT1002_03341	0.55	-0.0
3,734,166	-		MIT1002_03341	0.63	+0.7
3,734,270	-		MIT1002_03341	0.75	-0.3
3,734,310	+		MIT1002_03341	0.80	-0.1
3,734,317	-		MIT1002_03341	0.81	+0.5
3,734,318	-		MIT1002_03341	0.81	-0.1
3,734,391	-				+0.9
3,734,404	+				+0.0
3,734,421	-				+0.6
3,734,482	-				-1.0