Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03190

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,553,317	+		MIT1002_03188	0.44	-1.5
3,553,423	+		MIT1002_03188	0.58	-0.2
3,553,465	+		MIT1002_03188	0.64	+0.3
3,553,497	+		MIT1002_03188	0.68	-0.7
3,553,686	+				-1.5
3,553,696	-				-0.0
3,553,809	+		MIT1002_03189	0.13	+0.2
3,553,881	+		MIT1002_03189	0.31	-0.5
3,553,945	-		MIT1002_03189	0.47	+0.2
3,554,003	-		MIT1002_03189	0.61	-0.4
3,554,046	-		MIT1002_03189	0.72	+0.6
3,554,126	-				+1.3
3,554,270	-				+0.6
3,554,324	-				-0.1
3,554,335	+				+0.0
3,554,335	+				-0.0
3,554,343	-				-0.7
3,554,345	+				-0.5
3,554,345	+				+0.6
3,554,353	-				-0.5
3,554,393	+		MIT1002_03190	0.15	+0.6
3,554,448	-		MIT1002_03190	0.22	+0.9
3,554,464	-		MIT1002_03190	0.23	+1.3
3,554,464	-		MIT1002_03190	0.23	-1.1
3,554,497	+		MIT1002_03190	0.28	-0.4
3,554,507	+		MIT1002_03190	0.29	-2.2
3,554,524	-		MIT1002_03190	0.31	+0.1
3,554,529	-		MIT1002_03190	0.31	+0.5
3,554,535	+		MIT1002_03190	0.32	-1.8
3,554,545	+		MIT1002_03190	0.33	-0.7
3,554,545	-		MIT1002_03190	0.33	-0.3
3,554,589	+		MIT1002_03190	0.39	+0.3
3,554,597	-		MIT1002_03190	0.40	+0.3
3,554,597	-		MIT1002_03190	0.40	-1.5
3,554,619	+		MIT1002_03190	0.43	-0.5
3,554,619	+		MIT1002_03190	0.43	-0.1
3,554,627	-		MIT1002_03190	0.44	+0.2
3,554,627	-		MIT1002_03190	0.44	+1.3
3,554,627	-		MIT1002_03190	0.44	-0.2
3,554,710	+		MIT1002_03190	0.54	+0.5
3,554,710	+		MIT1002_03190	0.54	-1.1
3,554,711	+		MIT1002_03190	0.54	+0.6
3,554,728	-		MIT1002_03190	0.56	+1.5
3,554,744	+		MIT1002_03190	0.58	-0.1
3,554,744	+		MIT1002_03190	0.58	+1.0
3,554,823	+		MIT1002_03190	0.68	-0.2
3,554,899	+		MIT1002_03190	0.77	-1.0
3,554,945	-		MIT1002_03190	0.83	-0.4
3,554,994	-		MIT1002_03190	0.89	+0.7
3,555,086	+				+1.4
3,555,088	-				-0.1
3,555,088	-				-2.6
3,555,094	-				+1.3
3,555,094	-				-0.5
3,555,162	+				-0.1
3,555,201	+		MIT1002_03191	0.29	+1.6
3,555,219	+		MIT1002_03191	0.37	+0.9
3,555,240	-		MIT1002_03191	0.47	-1.1
3,555,255	+		MIT1002_03191	0.55	-0.9
3,555,255	+		MIT1002_03191	0.55	+0.6
3,555,255	+		MIT1002_03191	0.55	+1.4
3,555,263	-		MIT1002_03191	0.58	+0.3
3,555,263	-		MIT1002_03191	0.58	+0.6
3,555,273	-		MIT1002_03191	0.63	+1.3
3,555,288	+		MIT1002_03191	0.71	-0.2
3,555,434	-				+0.3
3,555,463	+				-0.0
3,555,522	-		MIT1002_03192	0.12	+0.8
3,555,524	+		MIT1002_03192	0.12	-0.4
3,555,524	+		MIT1002_03192	0.12	+0.2
3,555,526	+		MIT1002_03192	0.12	+0.8
3,555,532	-		MIT1002_03192	0.13	+0.5
3,555,534	-		MIT1002_03192	0.13	+0.1
3,555,534	-		MIT1002_03192	0.13	-0.1
3,555,663	+		MIT1002_03192	0.29	+0.5
3,555,684	+		MIT1002_03192	0.31	+0.5
3,555,718	+		MIT1002_03192	0.35	-0.5
3,555,906	-		MIT1002_03192	0.57	+0.2
3,555,912	+		MIT1002_03192	0.58	+0.4
3,555,917	+		MIT1002_03192	0.59	-0.2
3,555,917	+		MIT1002_03192	0.59	+0.0
3,555,927	-		MIT1002_03192	0.60	+0.6
3,555,996	-		MIT1002_03192	0.68	-0.8
3,556,035	+		MIT1002_03192	0.72	-1.5
3,556,080	+		MIT1002_03192	0.78	-0.2