Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03150

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,510,162	-		MIT1002_03149	0.34	+0.3
3,510,198	-		MIT1002_03149	0.37	-2.0
3,510,198	-		MIT1002_03149	0.37	-0.5
3,510,240	+		MIT1002_03149	0.40	+0.4
3,510,265	+		MIT1002_03149	0.42	+0.3
3,510,265	-		MIT1002_03149	0.42	-0.4
3,510,272	+		MIT1002_03149	0.43	+0.4
3,510,358	+		MIT1002_03149	0.49	+0.7
3,510,477	-		MIT1002_03149	0.58	-3.8
3,510,534	-		MIT1002_03149	0.62	-0.6
3,510,534	-		MIT1002_03149	0.62	+0.0
3,510,568	+		MIT1002_03149	0.64	-1.2
3,510,600	-		MIT1002_03149	0.67	-1.1
3,510,604	-		MIT1002_03149	0.67	+0.6
3,510,661	-		MIT1002_03149	0.71	+0.1
3,510,700	-		MIT1002_03149	0.74	-0.6
3,510,756	+		MIT1002_03149	0.78	+0.0
3,510,831	-		MIT1002_03149	0.84	+0.6
3,510,848	+		MIT1002_03149	0.85	+1.1
3,510,871	-		MIT1002_03149	0.87	+1.2
3,510,884	-		MIT1002_03149	0.88	-0.6
3,510,977	-				+0.5
3,510,986	-				+0.7
3,511,018	+				-0.0
3,511,018	+				+0.6
3,511,026	-				-0.5
3,511,084	-				-1.0
3,511,205	+		MIT1002_03150	0.16	-1.2
3,511,448	-		MIT1002_03150	0.84	-0.3
3,511,448	-		MIT1002_03150	0.84	-0.4