Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03036

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,382,606	+				+0.2
3,382,861	-		MIT1002_03035	0.36	+1.5
3,382,861	-		MIT1002_03035	0.36	-1.1
3,382,861	-		MIT1002_03035	0.36	-0.3
3,382,921	+		MIT1002_03035	0.43	-0.1
3,382,921	+		MIT1002_03035	0.43	+1.5
3,382,929	-		MIT1002_03035	0.44	+0.6
3,382,929	-		MIT1002_03035	0.44	-0.7
3,382,931	+		MIT1002_03035	0.44	-0.5
3,382,948	+		MIT1002_03035	0.46	-1.1
3,382,956	-		MIT1002_03035	0.47	+1.0
3,382,956	-		MIT1002_03035	0.47	-0.8
3,383,034	-		MIT1002_03035	0.57	+0.5
3,383,168	+		MIT1002_03035	0.73	+0.3
3,383,229	+		MIT1002_03035	0.80	-1.9
3,383,229	+		MIT1002_03035	0.80	-0.4
3,383,237	+		MIT1002_03035	0.81	-0.5
3,383,237	+		MIT1002_03035	0.81	-0.3
3,383,237	-		MIT1002_03035	0.81	-0.6
3,383,245	-		MIT1002_03035	0.82	-0.8
3,383,285	+		MIT1002_03035	0.87	-0.4
3,383,295	+		MIT1002_03035	0.88	-0.2
3,383,317	+				+0.2
3,383,371	-				-1.9
3,383,386	+				+0.0
3,383,394	-				+0.6
3,383,447	-				-1.1
3,383,447	-				+0.8
3,383,539	-				-0.6
3,383,655	+		MIT1002_03036	0.14	+0.8
3,383,681	-		MIT1002_03036	0.17	+0.7
3,383,724	+		MIT1002_03036	0.23	-1.9
3,383,727	+		MIT1002_03036	0.23	-0.3
3,383,764	+		MIT1002_03036	0.28	+0.0
3,383,792	+		MIT1002_03036	0.31	-1.2
3,383,792	+		MIT1002_03036	0.31	+1.2
3,383,800	-		MIT1002_03036	0.32	-0.4
3,383,801	-		MIT1002_03036	0.33	-0.2
3,383,801	-		MIT1002_03036	0.33	+0.3
3,383,838	+		MIT1002_03036	0.37	+0.3
3,383,966	-		MIT1002_03036	0.54	-0.7
3,384,019	-		MIT1002_03036	0.61	+0.2
3,384,102	+		MIT1002_03036	0.72	-2.5
3,384,113	+		MIT1002_03036	0.73	-2.2
3,384,121	-		MIT1002_03036	0.74	-1.6
3,384,121	-		MIT1002_03036	0.74	-1.9
3,384,126	-		MIT1002_03036	0.75	+0.1
3,384,129	+		MIT1002_03036	0.75	-0.8
3,384,254	-				-0.3
3,384,353	+				-0.9
3,384,410	+				+2.2
3,384,410	+				+0.2
3,384,418	-				-2.1
3,384,440	+				-1.0
3,384,478	+				+2.3
3,384,478	+				+0.3
3,384,478	+				-0.2
3,384,486	-				+0.1
3,384,486	-				+1.0
3,384,486	-				+0.0
3,384,486	-				-1.4
3,384,486	-				+0.2
3,384,568	+				+1.5
3,384,721	+				+0.7
3,384,743	-				+0.6
3,384,746	+				+0.4
3,384,746	+				-0.4
3,384,774	+				+0.2
3,384,774	+				-2.5
3,384,782	-				-0.9
3,384,783	-				+1.6
3,384,798	-				+0.2
3,384,944	+		MIT1002_03037	0.19	+0.6
3,384,952	-		MIT1002_03037	0.20	+0.2
3,384,952	-		MIT1002_03037	0.20	+0.1
3,384,954	-		MIT1002_03037	0.20	+0.0
3,384,992	+		MIT1002_03037	0.23	+0.1
3,384,992	+		MIT1002_03037	0.23	+0.5
3,384,992	+		MIT1002_03037	0.23	-0.2
3,385,196	+		MIT1002_03037	0.40	-0.0
3,385,235	-		MIT1002_03037	0.43	-1.4
3,385,292	+		MIT1002_03037	0.48	-0.1
3,385,301	-		MIT1002_03037	0.48	-0.8