Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02323

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
2,590,911	+				+0.3
2,590,928	+				-3.5
2,590,962	-		MIT1002_02322	0.12	+0.7
2,590,993	+		MIT1002_02322	0.15	+1.9
2,591,012	-		MIT1002_02322	0.18	+1.4
2,591,082	+		MIT1002_02322	0.26	+0.1
2,591,082	+		MIT1002_02322	0.26	-0.6
2,591,082	+		MIT1002_02322	0.26	+0.4
2,591,082	+		MIT1002_02322	0.26	-0.2
2,591,082	+		MIT1002_02322	0.26	+0.2
2,591,095	+		MIT1002_02322	0.28	+0.8
2,591,103	-		MIT1002_02322	0.29	+1.2
2,591,141	+		MIT1002_02322	0.33	+0.1
2,591,141	+		MIT1002_02322	0.33	+1.2
2,591,149	-		MIT1002_02322	0.34	-0.5
2,591,149	-		MIT1002_02322	0.34	-1.8
2,591,160	+		MIT1002_02322	0.36	-0.1
2,591,160	+		MIT1002_02322	0.36	-0.2
2,591,284	+		MIT1002_02322	0.51	-0.0
2,591,292	-		MIT1002_02322	0.52	+0.3
2,591,292	-		MIT1002_02322	0.52	-0.2
2,591,316	-		MIT1002_02322	0.55	-1.0
2,591,344	-		MIT1002_02322	0.58	-0.4
2,591,361	+		MIT1002_02322	0.60	+0.5
2,591,449	-		MIT1002_02322	0.71	+0.7
2,591,452	-		MIT1002_02322	0.72	-1.3
2,591,459	-		MIT1002_02322	0.72	-0.5
2,591,465	+		MIT1002_02322	0.73	-0.5
2,591,505	+		MIT1002_02322	0.78	+0.4
2,591,552	+		MIT1002_02322	0.84	-0.2
2,591,552	+		MIT1002_02322	0.84	+0.8
2,591,560	-		MIT1002_02322	0.85	-0.1
2,591,560	-		MIT1002_02322	0.85	+1.2
2,591,560	-		MIT1002_02322	0.85	+0.4
2,591,560	-		MIT1002_02322	0.85	+1.7
2,591,560	-		MIT1002_02322	0.85	+1.1
2,591,560	-		MIT1002_02322	0.85	+0.1
2,591,560	-		MIT1002_02322	0.85	-1.5
2,591,676	-				+0.9
2,591,702	+				-0.5
2,591,717	-				+1.0
2,591,751	+				+0.4
2,591,754	+				+0.2
2,591,835	+				-0.0
2,591,840	-				-0.6
2,591,841	+				-0.3
2,591,843	-				-0.2
2,591,895	+				+0.7
2,591,915	-		MIT1002_02323	0.11	+0.8
2,591,927	+		MIT1002_02323	0.12	+1.3
2,591,956	+		MIT1002_02323	0.14	+0.1
2,592,065	-		MIT1002_02323	0.22	+0.1
2,592,171	-		MIT1002_02323	0.29	-0.8
2,592,272	-		MIT1002_02323	0.37	-1.8
2,592,369	-		MIT1002_02323	0.44	-0.1
2,592,429	-		MIT1002_02323	0.48	+0.1
2,592,432	+		MIT1002_02323	0.48	-0.3
2,592,473	+		MIT1002_02323	0.51	-1.0
2,592,499	-		MIT1002_02323	0.53	-0.2
2,592,499	-		MIT1002_02323	0.53	-0.7
2,592,578	+		MIT1002_02323	0.59	-0.3
2,592,699	+		MIT1002_02323	0.68	-0.2
2,592,725	+		MIT1002_02323	0.70	-0.8
2,592,763	+		MIT1002_02323	0.72	-0.4
2,592,790	-		MIT1002_02323	0.74	+0.7
2,592,857	-		MIT1002_02323	0.79	-2.1
2,592,857	-		MIT1002_02323	0.79	-1.5
2,592,867	-		MIT1002_02323	0.80	-0.2
2,592,921	-		MIT1002_02323	0.84	-0.9
2,592,973	+		MIT1002_02323	0.88	-3.1
2,592,973	+		MIT1002_02323	0.88	-0.6
2,592,973	+		MIT1002_02323	0.88	-1.2
2,592,981	-		MIT1002_02323	0.88	-0.4
2,592,981	-		MIT1002_02323	0.88	+0.2
2,593,133	-				-1.7
2,593,135	+				+0.4
2,593,158	-				-2.2
2,593,229	+				-0.1
2,593,278	+		MIT1002_02324	0.11	+1.1
2,593,278	+		MIT1002_02324	0.11	-0.5
2,593,278	+		MIT1002_02324	0.11	-0.8
2,593,278	+		MIT1002_02324	0.11	-0.2
2,593,286	-		MIT1002_02324	0.12	-0.1
2,593,286	-		MIT1002_02324	0.12	+0.7
2,593,389	+		MIT1002_02324	0.20	+0.7
2,593,391	+		MIT1002_02324	0.20	+0.7
2,593,391	+		MIT1002_02324	0.20	-0.0
2,593,391	+		MIT1002_02324	0.20	+0.3
2,593,530	-		MIT1002_02324	0.31	-3.3
2,593,631	-		MIT1002_02324	0.39	-0.2
2,593,790	-		MIT1002_02324	0.52	+0.7
2,593,829	-		MIT1002_02324	0.55	-1.3
2,593,829	-		MIT1002_02324	0.55	-0.7
2,593,856	+		MIT1002_02324	0.57	-0.0
2,593,856	+		MIT1002_02324	0.57	+0.1
2,593,865	+		MIT1002_02324	0.58	+0.2
2,593,912	+		MIT1002_02324	0.62	-0.5
2,594,015	+		MIT1002_02324	0.70	+0.7