Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02313

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
2,578,766	+				-0.0
2,578,782	+				-1.2
2,578,808	+				-1.3
2,578,808	+				-0.5
2,578,808	+				+0.5
2,578,816	-				-0.3
2,579,030	-				-0.4
2,579,062	+				-0.9
2,579,088	-				-0.5
2,579,088	-				+0.7
2,579,132	+		MIT1002_02312	0.18	+2.0
2,579,140	-		MIT1002_02312	0.20	+0.3
2,579,296	+		MIT1002_02312	0.58	+0.1
2,579,301	+		MIT1002_02312	0.59	-0.7
2,579,311	+		MIT1002_02312	0.62	+1.4
2,579,311	-		MIT1002_02312	0.62	+0.1
2,579,319	-		MIT1002_02312	0.64	-0.6
2,579,319	-		MIT1002_02312	0.64	+0.7
2,579,373	+		MIT1002_02312	0.77	+0.0
2,579,391	-		MIT1002_02312	0.81	-0.6
2,579,405	-		MIT1002_02312	0.85	-0.5
2,579,405	-		MIT1002_02312	0.85	+0.8
2,579,415	-		MIT1002_02312	0.87	-0.6
2,579,450	+				-1.3
2,579,484	+				+1.3
2,579,492	-				+0.1
2,579,497	-				+0.7
2,579,516	+				+0.4
2,579,521	+				+0.4
2,579,529	-				+0.0
2,579,594	-				+0.2
2,579,596	-				-1.3
2,579,596	-				-0.8
2,579,596	-				+0.5
2,579,596	-				+2.4
2,579,596	-				+1.6
2,579,600	+				-1.6
2,579,686	-				+0.8
2,579,693	+				-0.2
2,579,718	+				-0.7
2,579,762	+				-0.6
2,579,800	-		MIT1002_02313	0.12	-0.5
2,579,870	-		MIT1002_02313	0.23	-0.7
2,579,928	-		MIT1002_02313	0.32	+0.7
2,580,034	+		MIT1002_02313	0.49	-0.8
2,580,034	+		MIT1002_02313	0.49	+0.8
2,580,034	+		MIT1002_02313	0.49	+0.1
2,580,037	-		MIT1002_02313	0.49	+0.1
2,580,037	-		MIT1002_02313	0.49	-0.7
2,580,042	-		MIT1002_02313	0.50	-2.1
2,580,047	-		MIT1002_02313	0.51	-0.1
2,580,056	+		MIT1002_02313	0.52	-0.4
2,580,086	+		MIT1002_02313	0.57	+0.1
2,580,131	-		MIT1002_02313	0.64	-0.6
2,580,225	+		MIT1002_02313	0.79	+0.3
2,580,266	-		MIT1002_02313	0.85	+0.2
2,580,338	+				+1.6
2,580,346	-				+0.1
2,580,346	-				+1.1
2,580,348	+				+0.2
2,580,380	+				-0.7
2,580,381	+				-2.8
2,580,389	-				+1.1
2,580,391	-				+1.0
2,580,452	-				+1.3
2,580,524	+				+0.3
2,580,580	+				-0.9
2,580,580	+				-0.7
2,580,580	+				+0.3
2,580,583	-				+0.7
2,580,588	-				+0.6
2,580,598	-				+0.4
2,580,614	+				+0.1
2,580,664	+				+1.2
2,580,767	-		MIT1002_02314	0.16	+0.0
2,580,821	-		MIT1002_02314	0.20	+0.3
2,580,838	+		MIT1002_02314	0.21	+0.5
2,580,838	+		MIT1002_02314	0.21	-0.3
2,580,844	-		MIT1002_02314	0.22	+1.1
2,580,898	+		MIT1002_02314	0.25	+0.3
2,580,906	-		MIT1002_02314	0.26	+0.5
2,580,906	-		MIT1002_02314	0.26	+3.7
2,580,928	+		MIT1002_02314	0.28	-0.3
2,580,954	+		MIT1002_02314	0.29	-0.0
2,581,011	+		MIT1002_02314	0.33	-1.8
2,581,019	-		MIT1002_02314	0.34	+0.5
2,581,036	+		MIT1002_02314	0.35	-1.2
2,581,083	-		MIT1002_02314	0.38	-1.4
2,581,083	-		MIT1002_02314	0.38	-1.3
2,581,109	+		MIT1002_02314	0.40	-0.8
2,581,124	+		MIT1002_02314	0.41	+0.9
2,581,196	-		MIT1002_02314	0.46	-0.5
2,581,247	-		MIT1002_02314	0.50	-0.6
2,581,249	+		MIT1002_02314	0.50	+1.4
2,581,316	+		MIT1002_02314	0.55	-0.2
2,581,318	-		MIT1002_02314	0.55	-3.1