Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01679

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
1,860,148	-		MIT1002_01678	0.31	-1.2
1,860,161	+		MIT1002_01678	0.32	-0.9
1,860,162	+		MIT1002_01678	0.32	+0.7
1,860,162	+		MIT1002_01678	0.32	+0.7
1,860,162	+		MIT1002_01678	0.32	+0.7
1,860,165	-		MIT1002_01678	0.33	-0.7
1,860,169	-		MIT1002_01678	0.33	-0.5
1,860,170	-		MIT1002_01678	0.33	-1.9
1,860,170	-		MIT1002_01678	0.33	-0.0
1,860,170	-		MIT1002_01678	0.33	+0.2
1,860,178	-		MIT1002_01678	0.34	+0.8
1,860,178	-		MIT1002_01678	0.34	+0.9
1,860,190	-		MIT1002_01678	0.35	+0.3
1,860,273	+		MIT1002_01678	0.43	+0.4
1,860,322	+		MIT1002_01678	0.47	-0.9
1,860,337	-		MIT1002_01678	0.49	+0.5
1,860,349	+		MIT1002_01678	0.50	+0.4
1,860,349	+		MIT1002_01678	0.50	-1.9
1,860,349	+		MIT1002_01678	0.50	+0.4
1,860,357	-		MIT1002_01678	0.51	-1.1
1,860,357	-		MIT1002_01678	0.51	+1.1
1,860,368	-		MIT1002_01678	0.52	+0.5
1,860,431	+		MIT1002_01678	0.57	-1.3
1,860,441	+		MIT1002_01678	0.58	+0.5
1,860,456	-		MIT1002_01678	0.60	-1.3
1,860,480	+		MIT1002_01678	0.62	+0.3
1,860,568	-		MIT1002_01678	0.70	+1.4
1,860,595	+		MIT1002_01678	0.73	-0.8
1,860,596	-		MIT1002_01678	0.73	-0.7
1,860,601	-		MIT1002_01678	0.73	-2.3
1,860,621	+		MIT1002_01678	0.75	-0.1
1,860,634	-		MIT1002_01678	0.76	+0.8
1,860,700	-		MIT1002_01678	0.83	-1.1
1,860,707	-		MIT1002_01678	0.83	+0.3
1,860,799	+				-0.1
1,860,807	-				+1.0
1,860,822	+				+0.0
1,860,830	-				+1.0
1,860,830	-				+1.1
1,860,830	-				+0.4
1,860,830	-				-0.1
1,860,935	-				+1.0
1,860,949	+				-1.6
1,860,957	-				+0.1
1,861,115	-		MIT1002_01679	0.12	+0.6
1,861,120	-		MIT1002_01679	0.13	-2.3
1,861,143	+		MIT1002_01679	0.19	-0.4
1,861,151	-		MIT1002_01679	0.20	-0.4
1,861,211	-		MIT1002_01679	0.35	+0.2
1,861,221	+		MIT1002_01679	0.37	-0.7
1,861,221	+		MIT1002_01679	0.37	-0.6
1,861,221	+		MIT1002_01679	0.37	-2.2
1,861,229	-		MIT1002_01679	0.39	-3.0
1,861,236	+		MIT1002_01679	0.41	-0.3
1,861,320	+		MIT1002_01679	0.61	+0.7
1,861,338	-		MIT1002_01679	0.65	+0.3
1,861,412	-		MIT1002_01679	0.83	-1.8
1,861,441	+		MIT1002_01679	0.90	-0.2
1,861,479	+				+0.8
1,861,479	+				-0.2
1,861,479	+				-0.4
1,861,479	+				+0.7
1,861,479	+				+0.1
1,861,487	-				+1.3
1,861,556	+				+1.4
1,861,566	+				-0.1
1,861,586	-				-1.2
1,861,623	-				-0.4
1,861,679	+				-0.3
1,861,791	+				+0.2
1,861,799	-				-0.7
1,861,799	-				-0.5
1,861,799	-				+0.0
1,861,832	+				+1.1
1,861,843	+				+0.5
1,861,851	+				-1.2
1,861,920	+		MIT1002_01680	0.11	-0.0
1,861,953	+		MIT1002_01680	0.12	-0.1
1,861,958	+		MIT1002_01680	0.13	-0.8
1,861,961	-		MIT1002_01680	0.13	+0.3
1,862,004	+		MIT1002_01680	0.15	+0.5
1,862,005	+		MIT1002_01680	0.15	-0.3
1,862,014	+		MIT1002_01680	0.15	+0.0
1,862,022	-		MIT1002_01680	0.15	+0.3
1,862,022	-		MIT1002_01680	0.15	+0.2
1,862,107	+		MIT1002_01680	0.19	+0.7
1,862,125	-		MIT1002_01680	0.20	+0.3
1,862,163	+		MIT1002_01680	0.22	-0.4
1,862,194	+		MIT1002_01680	0.23	+0.5
1,862,203	-		MIT1002_01680	0.23	-0.4
1,862,334	+		MIT1002_01680	0.29	+0.1
1,862,334	+		MIT1002_01680	0.29	+1.6
1,862,337	-		MIT1002_01680	0.29	+0.4
1,862,337	-		MIT1002_01680	0.29	+0.7
1,862,342	-		MIT1002_01680	0.29	+0.1
1,862,376	+		MIT1002_01680	0.31	-0.3
1,862,407	+		MIT1002_01680	0.32	+0.4
1,862,454	+		MIT1002_01680	0.34	+2.8