Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01640

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
1,809,992	-				+0.9
1,810,128	-				-0.5
1,810,173	-		MIT1002_01639	0.14	+0.7
1,810,184	+		MIT1002_01639	0.16	-0.5
1,810,223	-		MIT1002_01639	0.23	+0.4
1,810,254	+		MIT1002_01639	0.29	-0.7
1,810,262	-		MIT1002_01639	0.30	-0.2
1,810,307	+		MIT1002_01639	0.38	-0.4
1,810,307	+		MIT1002_01639	0.38	+0.2
1,810,307	+		MIT1002_01639	0.38	+1.2
1,810,307	+		MIT1002_01639	0.38	-0.5
1,810,307	+		MIT1002_01639	0.38	-0.4
1,810,315	-		MIT1002_01639	0.40	+0.7
1,810,320	+		MIT1002_01639	0.41	+0.6
1,810,377	+		MIT1002_01639	0.51	+0.1
1,810,417	+		MIT1002_01639	0.59	+0.2
1,810,512	+		MIT1002_01639	0.76	+0.2
1,810,520	-		MIT1002_01639	0.77	+0.4
1,810,595	+				-0.8
1,810,598	-				-0.0
1,810,685	+				-0.2
1,810,705	-				-1.7
1,810,718	-				-5.9
1,810,830	+				-2.0
1,810,830	+				+0.4
1,810,830	+				-1.1
1,810,830	+				+0.9
1,810,838	-				+0.2
1,810,838	-				-0.4
1,810,838	-				-0.2
1,810,838	-				-0.2
1,810,841	-				-0.2
1,810,851	+				+0.5
1,810,888	+				-0.2
1,810,896	-				+0.3
1,810,896	-				+1.5
1,810,969	+				-0.7
1,810,990	+				-1.7
1,811,015	+		MIT1002_01640	0.12	-1.5
1,811,056	+		MIT1002_01640	0.19	-1.0
1,811,105	+		MIT1002_01640	0.27	-0.3
1,811,112	-		MIT1002_01640	0.28	+0.1
1,811,113	-		MIT1002_01640	0.29	-0.6
1,811,122	-		MIT1002_01640	0.30	+0.2
1,811,127	-		MIT1002_01640	0.31	-0.0
1,811,127	-		MIT1002_01640	0.31	-0.4
1,811,173	+		MIT1002_01640	0.39	-1.8
1,811,173	+		MIT1002_01640	0.39	-0.7
1,811,173	+		MIT1002_01640	0.39	-0.2
1,811,173	+		MIT1002_01640	0.39	-0.5
1,811,181	-		MIT1002_01640	0.40	+0.4
1,811,181	-		MIT1002_01640	0.40	+0.2
1,811,239	-		MIT1002_01640	0.50	+0.3
1,811,325	-		MIT1002_01640	0.64	+0.7
1,811,396	-		MIT1002_01640	0.76	+0.9
1,811,398	+		MIT1002_01640	0.77	-1.8
1,811,406	-		MIT1002_01640	0.78	-0.5
1,811,406	-		MIT1002_01640	0.78	-0.8
1,811,445	+		MIT1002_01640	0.85	+0.0
1,811,445	+		MIT1002_01640	0.85	-0.3
1,811,453	-		MIT1002_01640	0.86	+0.2
1,811,453	-		MIT1002_01640	0.86	-1.2
1,811,488	+				-0.2
1,811,579	+				+0.5
1,811,587	-				-1.0
1,811,663	-		MIT1002_01641	0.14	-0.1
1,811,665	+		MIT1002_01641	0.14	+0.2
1,811,665	+		MIT1002_01641	0.14	-0.1
1,811,673	-		MIT1002_01641	0.16	-1.2
1,811,716	-		MIT1002_01641	0.25	-0.2
1,811,716	-		MIT1002_01641	0.25	-2.0
1,811,784	-		MIT1002_01641	0.40	-0.4
1,811,946	+		MIT1002_01641	0.74	+1.4
1,811,972	+		MIT1002_01641	0.80	-0.7
1,811,977	-		MIT1002_01641	0.81	-0.3
1,812,102	-				+0.5
1,812,112	+				-0.6
1,812,128	+				+0.7
1,812,219	+				-2.4
1,812,236	-				-0.4
1,812,286	+				+0.4
1,812,294	-				-0.2
1,812,387	-		MIT1002_01642	0.13	+2.5
1,812,404	-		MIT1002_01642	0.14	-0.4
1,812,425	+		MIT1002_01642	0.15	+1.1
1,812,433	-		MIT1002_01642	0.15	-1.2
1,812,433	-		MIT1002_01642	0.15	+0.5
1,812,500	-		MIT1002_01642	0.18	-0.5
1,812,515	+		MIT1002_01642	0.19	+0.2