Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01395

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
1,545,203	-		MIT1002_01394	0.70	+1.2
1,545,203	-		MIT1002_01394	0.70	-0.4
1,545,258	+		MIT1002_01394	0.73	-0.0
1,545,266	-		MIT1002_01394	0.73	-1.3
1,545,290	+		MIT1002_01394	0.75	+1.0
1,545,390	+		MIT1002_01394	0.80	+1.2
1,545,390	+		MIT1002_01394	0.80	-0.0
1,545,390	+		MIT1002_01394	0.80	-0.0
1,545,393	-		MIT1002_01394	0.80	-0.3
1,545,398	-		MIT1002_01394	0.80	+1.3
1,545,431	-		MIT1002_01394	0.82	+1.7
1,545,522	+		MIT1002_01394	0.87	-0.4
1,545,532	+		MIT1002_01394	0.88	-1.1
1,545,596	+				+0.1
1,545,596	+				-0.0
1,545,640	+				-0.6
1,545,643	-				-0.5
1,545,645	-				-0.1
1,545,683	+				-1.1
1,545,760	-				+2.0
1,545,775	-				-3.2
1,545,792	-				+0.4
1,545,844	-				-0.5
1,545,849	-				-0.4
1,546,057	+				+0.7
1,546,062	+				-0.0
1,546,062	+				-2.7
1,546,062	+				+1.9
1,546,062	+				-0.6
1,546,062	+				-1.1
1,546,062	+				+1.4
1,546,062	+				+0.3
1,546,062	+				-0.8
1,546,062	+				+0.5
1,546,065	-				+1.2
1,546,070	-				-0.5
1,546,070	-				-0.2
1,546,180	+		MIT1002_01395	0.11	-0.4
1,546,205	-		MIT1002_01395	0.13	-0.1
1,546,408	+		MIT1002_01395	0.34	-0.1
1,546,408	+		MIT1002_01395	0.34	-0.9
1,546,408	+		MIT1002_01395	0.34	-2.4
1,546,408	+		MIT1002_01395	0.34	-1.8
1,546,408	+		MIT1002_01395	0.34	+0.5
1,546,414	+		MIT1002_01395	0.35	-0.4
1,546,416	-		MIT1002_01395	0.35	-1.1
1,546,416	-		MIT1002_01395	0.35	-0.1
1,546,416	-		MIT1002_01395	0.35	-0.3
1,546,416	-		MIT1002_01395	0.35	+0.1
1,546,416	-		MIT1002_01395	0.35	-0.2
1,546,439	+		MIT1002_01395	0.37	+0.9
1,546,447	-		MIT1002_01395	0.38	+0.5
1,546,471	+		MIT1002_01395	0.41	+2.1
1,546,490	-		MIT1002_01395	0.43	-0.4
1,546,526	+		MIT1002_01395	0.46	-2.5
1,546,557	-		MIT1002_01395	0.49	-1.6
1,546,613	-		MIT1002_01395	0.55	-0.8
1,546,638	+		MIT1002_01395	0.58	+0.1
1,546,677	+		MIT1002_01395	0.62	+0.0
1,546,774	-		MIT1002_01395	0.72	+0.2
1,546,844	+		MIT1002_01395	0.79	-0.6
1,547,034	+				-1.4
1,547,054	+				+0.2
1,547,181	+				+1.6
1,547,286	+		MIT1002_01396	0.21	+1.0
1,547,340	+		MIT1002_01396	0.31	+0.7
1,547,341	-		MIT1002_01396	0.31	+0.5
1,547,355	+		MIT1002_01396	0.34	+2.1
1,547,355	+		MIT1002_01396	0.34	-0.1
1,547,355	+		MIT1002_01396	0.34	-0.7
1,547,362	+		MIT1002_01396	0.35	+0.1
1,547,363	-		MIT1002_01396	0.36	+2.0
1,547,380	+		MIT1002_01396	0.39	-0.8
1,547,421	+		MIT1002_01396	0.47	-0.1
1,547,450	+		MIT1002_01396	0.52	+0.0
1,547,450	-		MIT1002_01396	0.52	+0.3
1,547,501	+		MIT1002_01396	0.62	+0.1
1,547,501	+		MIT1002_01396	0.62	-1.2
1,547,507	+		MIT1002_01396	0.63	+0.1
1,547,509	-		MIT1002_01396	0.63	+1.9
1,547,515	+		MIT1002_01396	0.64	+0.0
1,547,515	-		MIT1002_01396	0.64	-1.3
1,547,515	-		MIT1002_01396	0.64	+0.5
1,547,557	-		MIT1002_01396	0.72	-0.1
1,547,557	-		MIT1002_01396	0.72	-0.1
1,547,661	+				+0.9
1,547,700	-				-0.7
1,547,778	+				+1.0
1,547,864	+				+0.1
1,547,872	-				+0.2
1,547,872	-				-2.2
1,547,965	+		MIT1002_01397	0.13	-0.1
1,547,965	+		MIT1002_01397	0.13	+0.3
1,547,965	+		MIT1002_01397	0.13	-0.7
1,547,973	-		MIT1002_01397	0.14	+0.5
1,547,973	-		MIT1002_01397	0.14	+0.3
1,547,989	+		MIT1002_01397	0.15	-0.2
1,547,989	+		MIT1002_01397	0.15	+0.2
1,547,989	+		MIT1002_01397	0.15	+0.5
1,547,989	+		MIT1002_01397	0.15	-5.3
1,547,997	-		MIT1002_01397	0.15	+0.3
1,547,997	-		MIT1002_01397	0.15	+0.1
1,547,997	-		MIT1002_01397	0.15	-3.9
1,547,997	-		MIT1002_01397	0.15	+1.7
1,548,007	-		MIT1002_01397	0.16	-0.5