Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01383

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
1,533,639	-		MIT1002_01381	0.78	-1.3
1,533,674	+		MIT1002_01381	0.81	-0.6
1,533,692	+		MIT1002_01381	0.83	+0.4
1,533,697	+		MIT1002_01381	0.83	+2.6
1,533,728	+		MIT1002_01381	0.86	+0.6
1,533,733	+		MIT1002_01381	0.87	+1.6
1,533,735	-		MIT1002_01381	0.87	-1.2
1,533,852	+				+0.6
1,533,891	-				-0.9
1,533,913	+				+0.1
1,533,940	+				-0.7
1,533,948	-				-1.0
1,533,948	-				-1.2
1,533,948	-				+0.3
1,534,009	+		MIT1002_01382	0.17	-0.1
1,534,009	+		MIT1002_01382	0.17	-1.0
1,534,015	-		MIT1002_01382	0.18	+1.0
1,534,017	-		MIT1002_01382	0.18	-0.1
1,534,214	-		MIT1002_01382	0.44	-1.6
1,534,236	+		MIT1002_01382	0.47	+0.1
1,534,257	+		MIT1002_01382	0.50	-1.1
1,534,313	-		MIT1002_01382	0.57	+0.3
1,534,313	-		MIT1002_01382	0.57	+0.2
1,534,318	-		MIT1002_01382	0.57	-0.8
1,534,326	-		MIT1002_01382	0.58	-0.1
1,534,332	+		MIT1002_01382	0.59	+0.1
1,534,345	+		MIT1002_01382	0.61	-0.1
1,534,345	+		MIT1002_01382	0.61	+0.9
1,534,345	+		MIT1002_01382	0.61	-0.2
1,534,353	-		MIT1002_01382	0.62	-0.1
1,534,407	-		MIT1002_01382	0.69	-0.6
1,534,493	+		MIT1002_01382	0.80	-1.0
1,534,543	-		MIT1002_01382	0.87	+0.4
1,534,545	+		MIT1002_01382	0.87	+0.2
1,534,547	+		MIT1002_01382	0.87	-1.5
1,534,744	-		MIT1002_01383	0.18	+0.2
1,534,744	-		MIT1002_01383	0.18	+0.9
1,534,749	-		MIT1002_01383	0.18	-2.3
1,534,749	-		MIT1002_01383	0.18	-0.8
1,534,749	-		MIT1002_01383	0.18	+0.0
1,534,749	-		MIT1002_01383	0.18	+0.7
1,534,749	-		MIT1002_01383	0.18	-0.0
1,534,773	-		MIT1002_01383	0.22	+2.0
1,534,779	+		MIT1002_01383	0.23	-0.4
1,535,133	+		MIT1002_01383	0.72	+0.5
1,535,141	-		MIT1002_01383	0.73	+1.8
1,535,143	-		MIT1002_01383	0.73	+0.8
1,535,148	+		MIT1002_01383	0.74	-1.0
1,535,221	-		MIT1002_01383	0.84	+1.1
1,535,225	+		MIT1002_01383	0.84	+0.2
1,535,283	+				-0.1
1,535,315	-				+0.5
1,535,402	+				-3.1
1,535,404	+				-1.0
1,535,418	+				-0.7
1,535,450	-				-1.1
1,535,522	-		MIT1002_01384	0.19	-0.0
1,535,522	-		MIT1002_01384	0.19	+1.6
1,535,522	-		MIT1002_01384	0.19	-2.0
1,535,524	-		MIT1002_01384	0.19	-2.5
1,535,711	-		MIT1002_01384	0.58	+0.8
1,535,735	-		MIT1002_01384	0.64	+0.0
1,535,738	+		MIT1002_01384	0.64	-1.5
1,535,829	+		MIT1002_01384	0.83	-0.6
1,535,829	+		MIT1002_01384	0.83	+0.3
1,535,837	-		MIT1002_01384	0.85	+0.1
1,535,837	-		MIT1002_01384	0.85	+0.6
1,536,114	-		MIT1002_01385	0.15	+2.3
1,536,125	-		MIT1002_01385	0.16	+0.3
1,536,152	-		MIT1002_01385	0.19	-0.4
1,536,154	+		MIT1002_01385	0.19	-3.0
1,536,154	+		MIT1002_01385	0.19	-0.4
1,536,154	+		MIT1002_01385	0.19	-0.0
1,536,154	+		MIT1002_01385	0.19	+0.5
1,536,154	+		MIT1002_01385	0.19	-0.0
1,536,154	+		MIT1002_01385	0.19	-0.5
1,536,154	+		MIT1002_01385	0.19	-1.0
1,536,162	-		MIT1002_01385	0.20	-1.1
1,536,162	-		MIT1002_01385	0.20	-1.4
1,536,162	-		MIT1002_01385	0.20	+0.2
1,536,162	-		MIT1002_01385	0.20	+0.5
1,536,244	-		MIT1002_01385	0.28	-1.5
1,536,267	-		MIT1002_01385	0.31	-0.0
1,536,276	+		MIT1002_01385	0.32	+1.0
1,536,333	+		MIT1002_01385	0.38	+1.3